Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD4L1Q9NU39 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD4L1Q9NU39 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXD4L1Q9NU39 RNU6-302P-201ENST00000365249 107 ntBASIC3.01□□□□□ -1.93
FOXD4L1Q9NU39 RNA5SP21-201ENST00000410917 96 ntBASIC3.01□□□□□ -1.93
FOXD4L1Q9NU39 RNA5SP147-201ENST00000516493 109 ntBASIC3.01□□□□□ -1.93
FOXD4L1Q9NU39 RNU6-902P-201ENST00000517212 91 ntBASIC3.01□□□□□ -1.93
FOXD4L1Q9NU39 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXD4L1Q9NU39 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
FOXD4L1Q9NU39 UBE2DNL-203ENST00000474922 222 ntBASIC3□□□□□ -1.93
FOXD4L1Q9NU39 AC010297.1-201ENST00000623948 149 ntBASIC3□□□□□ -1.93
FOXD4L1Q9NU39 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
FOXD4L1Q9NU39 SNORA80A-201ENST00000363922 136 ntBASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 MIR676-201ENST00000390702 67 ntBASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 SUMO2P12-201ENST00000405924 140 ntBASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 SNORA70.22-201ENST00000517160 124 ntBASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 MIR4460-201ENST00000577862 86 ntBASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXD4L1Q9NU39 Y_RNA.500-201ENST00000384466 111 ntBASIC2.98□□□□□ -1.93
FOXD4L1Q9NU39 MIR644A-201ENST00000385262 94 ntBASIC2.98□□□□□ -1.93
FOXD4L1Q9NU39 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.98□□□□□ -1.93
FOXD4L1Q9NU39 AC079804.2-201ENST00000490376 200 ntBASIC2.98□□□□□ -1.93
FOXD4L1Q9NU39 RPL23AP94-201ENST00000512518 302 ntBASIC2.98□□□□□ -1.93
FOXD4L1Q9NU39 MIR4639-201ENST00000584938 69 ntBASIC2.98□□□□□ -1.93
FOXD4L1Q9NU39 MIR6073-201ENST00000352083 89 ntBASIC2.97□□□□□ -1.93
FOXD4L1Q9NU39 RNA5SP489-201ENST00000410986 109 ntBASIC2.97□□□□□ -1.93
FOXD4L1Q9NU39 AC002350.1-201ENST00000490759 375 ntBASIC2.97□□□□□ -1.93
FOXD4L1Q9NU39 RNU6-1089P-201ENST00000516473 104 ntBASIC2.97□□□□□ -1.93
FOXD4L1Q9NU39 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXD4L1Q9NU39 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
FOXD4L1Q9NU39 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
FOXD4L1Q9NU39 SNORA7.1-201ENST00000363750 139 ntBASIC2.96□□□□□ -1.94
FOXD4L1Q9NU39 MT-TY-201ENST00000387409 66 ntBASIC2.96□□□□□ -1.94
FOXD4L1Q9NU39 AL356379.1-201ENST00000414105 126 ntBASIC2.96□□□□□ -1.94
FOXD4L1Q9NU39 RNU6-656P-201ENST00000516785 107 ntBASIC2.96□□□□□ -1.94
FOXD4L1Q9NU39 MIR21-201ENST00000362134 72 ntBASIC2.95□□□□□ -1.94
FOXD4L1Q9NU39 SNORD41.1-201ENST00000391000 69 ntBASIC2.95□□□□□ -1.94
FOXD4L1Q9NU39 AC244669.1-204ENST00000621564 178 ntBASIC2.95□□□□□ -1.94
FOXD4L1Q9NU39 MIR6739-201ENST00000622461 75 ntBASIC2.95□□□□□ -1.94
FOXD4L1Q9NU39 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 RNU6-990P-201ENST00000364385 104 ntBASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 SNORD12-201ENST00000391002 90 ntBASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 MIR5092-201ENST00000583139 88 ntBASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXD4L1Q9NU39 SNORD114-4-201ENST00000363962 75 ntBASIC2.93□□□□□ -1.94
FOXD4L1Q9NU39 MIR222-201ENST00000384992 110 ntBASIC2.93□□□□□ -1.94
FOXD4L1Q9NU39 RNA5SP402-201ENST00000517148 110 ntBASIC2.93□□□□□ -1.94
FOXD4L1Q9NU39 AL033523.1-201ENST00000605153 153 ntBASIC2.93□□□□□ -1.94
FOXD4L1Q9NU39 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXD4L1Q9NU39 AC018659.1-201ENST00000551083 169 ntBASIC2.92□□□□□ -1.94
FOXD4L1Q9NU39 RNU6-92P-201ENST00000605893 104 ntBASIC2.92□□□□□ -1.94
FOXD4L1Q9NU39 SNORD28-201ENST00000384706 75 ntBASIC2.91□□□□□ -1.94
FOXD4L1Q9NU39 Y_RNA.722-201ENST00000517279 114 ntBASIC2.91□□□□□ -1.94
FOXD4L1Q9NU39 MIR548V-201ENST00000584165 80 ntBASIC2.91□□□□□ -1.94
FOXD4L1Q9NU39 MIR6895-201ENST00000613497 78 ntBASIC2.91□□□□□ -1.94
FOXD4L1Q9NU39 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
FOXD4L1Q9NU39 Y_RNA.250-201ENST00000364542 110 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 RNU6-1162P-201ENST00000384443 104 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 SNORD109B-201ENST00000458961 67 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 SNORD109A-201ENST00000459128 67 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 RNU6-122P-201ENST00000516818 107 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 AL096840.1-201ENST00000603287 93 ntBASIC2.9□□□□□ -1.95
FOXD4L1Q9NU39 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXD4L1Q9NU39 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
FOXD4L1Q9NU39 RNA5SP320-201ENST00000516263 124 ntBASIC2.88□□□□□ -1.95
FOXD4L1Q9NU39 MIR3938-201ENST00000582157 103 ntBASIC2.88□□□□□ -1.95
FOXD4L1Q9NU39 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXD4L1Q9NU39 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXD4L1Q9NU39 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
FOXD4L1Q9NU39 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXD4L1Q9NU39 MIR548C-201ENST00000384815 97 ntBASIC2.87□□□□□ -1.95
FOXD4L1Q9NU39 AC025033.1-201ENST00000463883 194 ntBASIC2.87□□□□□ -1.95
FOXD4L1Q9NU39 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.87□□□□□ -1.95
FOXD4L1Q9NU39 SNORA40.17-201ENST00000517256 115 ntBASIC2.86□□□□□ -1.95
FOXD4L1Q9NU39 RNA5SP456-201ENST00000364002 114 ntBASIC2.85□□□□□ -1.95
FOXD4L1Q9NU39 MIR9-1-201ENST00000385198 89 ntBASIC2.85□□□□□ -1.95
FOXD4L1Q9NU39 Z82195.2-201ENST00000612348 18351 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 RNU6-859P-201ENST00000362728 107 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 MIR196B-201ENST00000384852 84 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 RNU6-808P-201ENST00000391233 108 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 AC108210.2-201ENST00000503681 201 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 MIR4319-201ENST00000577285 85 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 AL049779.4-201ENST00000604500 156 ntBASIC2.84□□□□□ -1.95
FOXD4L1Q9NU39 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
FOXD4L1Q9NU39 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
FOXD4L1Q9NU39 MIR449A-201ENST00000362113 91 ntBASIC2.83□□□□□ -1.96
FOXD4L1Q9NU39 RNU1-141P-201ENST00000364623 158 ntBASIC2.83□□□□□ -1.96
FOXD4L1Q9NU39 MIR4513-201ENST00000581077 86 ntBASIC2.83□□□□□ -1.96
FOXD4L1Q9NU39 MIR5694-201ENST00000581190 76 ntBASIC2.83□□□□□ -1.96
FOXD4L1Q9NU39 RNU6-446P-201ENST00000362827 106 ntBASIC2.82□□□□□ -1.96
FOXD4L1Q9NU39 AC002429.1-201ENST00000437672 148 ntBASIC2.82□□□□□ -1.96
FOXD4L1Q9NU39 RNU6-726P-201ENST00000364680 107 ntBASIC2.81□□□□□ -1.96
FOXD4L1Q9NU39 RNU6-716P-201ENST00000365621 103 ntBASIC2.81□□□□□ -1.96
FOXD4L1Q9NU39 SNORD89-201ENST00000390981 114 ntBASIC2.81□□□□□ -1.96
FOXD4L1Q9NU39 AL157398.1-201ENST00000452981 186 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 289.6 ms