Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTATP6P21-201ENST00000440681 189 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.14□□□□□ -2.59
CISHQ9NSE2 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 RNY3P16-201ENST00000516338 101 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 MIR4643-201ENST00000577473 78 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 MIR3149-201ENST00000584629 83 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 snoR1.1-201ENST00000628177 80 ntBASIC-1.14□□□□□ -2.59
CISHQ9NSE2 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 RNA5SP192-201ENST00000364404 120 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 SNORD42.2-201ENST00000365570 69 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 RNU6-588P-201ENST00000410281 105 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 AC113618.1-201ENST00000416747 285 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 RNY1P9-201ENST00000532431 109 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 AC113195.1-201ENST00000579952 141 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 AC139792.2-201ENST00000624218 587 ntBASIC-1.15□□□□□ -2.59
CISHQ9NSE2 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 SNORD114-17-201ENST00000364699 75 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 MIR451A-201ENST00000385059 72 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 MIR124-2-201ENST00000385081 109 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 MIR1255B1-201ENST00000636325 63 ntBASIC-1.16□□□□□ -2.6
CISHQ9NSE2 MIR369-201ENST00000362155 70 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 RNU6-818P-201ENST00000364837 108 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 RNU6-275P-201ENST00000364910 107 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 RNU6-466P-201ENST00000391224 103 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 U3.27-201ENST00000391237 200 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 MIR548G-201ENST00000408442 89 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 RNU7-6P-201ENST00000516845 62 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 MIR4464-201ENST00000580818 92 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 MIR4306-201ENST00000583390 91 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 AC108081.1-201ENST00000604358 221 ntBASIC-1.17□□□□□ -2.6
CISHQ9NSE2 RNU6-647P-201ENST00000364243 107 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 RNU6-309P-201ENST00000364573 106 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 SNORA63.6-201ENST00000364921 119 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 SNORD57-201ENST00000448188 72 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 snoU83B.1-201ENST00000517136 88 ntBASIC-1.18□□□□□ -2.6
CISHQ9NSE2 MIR335-201ENST00000362173 94 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 RNU6-493P-201ENST00000391321 108 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 RNU6-90P-201ENST00000606352 106 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 AL137067.1-201ENST00000615933 120 ntBASIC-1.19□□□□□ -2.6
CISHQ9NSE2 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 RNY1P11-201ENST00000363759 113 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 SNORD38.1-201ENST00000363863 68 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 SNORA62.4-201ENST00000365504 151 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.2□□□□□ -2.6
CISHQ9NSE2 RNU6-75P-201ENST00000515944 104 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 MIR4308-201ENST00000580634 81 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 YWHAEP3-201ENST00000582767 121 ntBASIC-1.2□□□□□ -2.6
CISHQ9NSE2 RNU4-32P-201ENST00000363404 141 ntBASIC-1.21□□□□□ -2.6
CISHQ9NSE2 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.21□□□□□ -2.6
CISHQ9NSE2 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.21□□□□□ -2.6
CISHQ9NSE2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.21□□□□□ -2.6
CISHQ9NSE2 MIR3165-201ENST00000579874 75 ntBASIC-1.21□□□□□ -2.6
CISHQ9NSE2 U6.106-201ENST00000636360 105 ntBASIC-1.21□□□□□ -2.6
CISHQ9NSE2 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.22□□□□□ -2.6
CISHQ9NSE2 SNORA75.5-201ENST00000391291 81 ntBASIC-1.22□□□□□ -2.6
CISHQ9NSE2 SNORA7.5-201ENST00000410672 110 ntBASIC-1.22□□□□□ -2.6
CISHQ9NSE2 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.22□□□□□ -2.6
CISHQ9NSE2 MIR4320-201ENST00000636981 65 ntBASIC-1.22□□□□□ -2.6
CISHQ9NSE2 RNU6-208P-201ENST00000362431 107 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 RBMX2P4-201ENST00000441256 376 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 MTND1P19-201ENST00000511780 315 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 RNU6-875P-201ENST00000516488 106 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 MIR3163-201ENST00000581592 73 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 AC090617.8-201ENST00000623339 167 ntBASIC-1.23□□□□□ -2.61
CISHQ9NSE2 RNU6-495P-201ENST00000362995 107 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNU6-990P-201ENST00000364385 104 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNY4P28-201ENST00000365281 93 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNU6-474P-201ENST00000384243 107 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.24□□□□□ -2.61
CISHQ9NSE2 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNU6-719P-201ENST00000516671 104 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 U6atac.1-201ENST00000616025 117 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 AL445584.3-201ENST00000617173 78 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 MIR6888-201ENST00000621977 67 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 AC021753.1-201ENST00000635724 168 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 AL512310.12-203ENST00000640543 90 ntBASIC-1.24□□□□□ -2.61
CISHQ9NSE2 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.25□□□□□ -2.61
CISHQ9NSE2 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms