Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SEC61A2Q9H9S3 RNU1-119P-201ENST00000391122 165 ntBASIC1.28□□□□□ -2.2
SEC61A2Q9H9S3 AC097635.1-201ENST00000450678 155 ntBASIC1.28□□□□□ -2.2
SEC61A2Q9H9S3 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
SEC61A2Q9H9S3 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-1094P-201ENST00000362416 104 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-686P-201ENST00000364839 107 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 MIR4696-201ENST00000581431 70 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 AC145423.2-201ENST00000610631 239 ntBASIC1.27□□□□□ -2.21
SEC61A2Q9H9S3 MIRLET7A1-201ENST00000362295 80 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-664P-201ENST00000362381 107 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 SNORD101-201ENST00000384027 73 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 AC002429.1-201ENST00000437672 148 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-557P-201ENST00000516842 110 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 MIR4484-201ENST00000582855 83 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 Y_RNA.788-201ENST00000622394 112 ntBASIC1.26□□□□□ -2.21
SEC61A2Q9H9S3 MIR378A-201ENST00000362177 66 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 SNORA25.9-201ENST00000365087 128 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 Y_RNA.565-201ENST00000384719 101 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-1052P-201ENST00000411398 104 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 snoU13.17-201ENST00000458802 104 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 FGF7P7-201ENST00000514120 227 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-719P-201ENST00000516671 104 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 U7.4-201ENST00000614961 63 ntBASIC1.25□□□□□ -2.21
SEC61A2Q9H9S3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-208P-201ENST00000362431 107 ntBASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 SNORD77.2-201ENST00000391045 68 ntBASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 SNORA31.14-201ENST00000516728 116 ntBASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 MIR3140-201ENST00000583685 90 ntBASIC1.24□□□□□ -2.21
SEC61A2Q9H9S3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SEC61A2Q9H9S3 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
SEC61A2Q9H9S3 MIR1827-201ENST00000408549 66 ntBASIC1.23□□□□□ -2.21
SEC61A2Q9H9S3 Y_RNA.596-201ENST00000410462 109 ntBASIC1.23□□□□□ -2.21
SEC61A2Q9H9S3 SCARNA18B-201ENST00000458806 135 ntBASIC1.23□□□□□ -2.21
SEC61A2Q9H9S3 MIR520H-201ENST00000385126 88 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 SNORD89-201ENST00000390981 114 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 RNU6-380P-201ENST00000410207 107 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 RMST_2.1-201ENST00000617263 136 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.22□□□□□ -2.21
SEC61A2Q9H9S3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.21□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.532-201ENST00000384590 113 ntBASIC1.21□□□□□ -2.22
SEC61A2Q9H9S3 SNORD12-201ENST00000391002 90 ntBASIC1.21□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.660-201ENST00000516002 120 ntBASIC1.21□□□□□ -2.22
SEC61A2Q9H9S3 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.21□□□□□ -2.22
SEC61A2Q9H9S3 uc_338.16-201ENST00000621804 95 ntBASIC1.21□□□□□ -2.22
SEC61A2Q9H9S3 SNORD115-24-201ENST00000363528 82 ntBASIC1.2□□□□□ -2.22
SEC61A2Q9H9S3 AC244505.6-201ENST00000452829 130 ntBASIC1.2□□□□□ -2.22
SEC61A2Q9H9S3 RNU6-1265P-201ENST00000516342 103 ntBASIC1.2□□□□□ -2.22
SEC61A2Q9H9S3 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
SEC61A2Q9H9S3 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
SEC61A2Q9H9S3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.12-201ENST00000362393 112 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 RNU5F-1-201ENST00000362507 117 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.371-201ENST00000365591 113 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 MIR451A-201ENST00000385059 72 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 MIR3134-201ENST00000579433 74 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 MTRNR2L2-201ENST00000604882 87 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 AL136317.1-201ENST00000612653 226 ntBASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SEC61A2Q9H9S3 SNORA7.1-201ENST00000363750 139 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 MIR644A-201ENST00000385262 94 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 RNU6-287P-201ENST00000516230 98 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 RNU6-935P-201ENST00000410371 100 ntBASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 AC073261.1-201ENST00000429409 121 ntBASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 AL359821.1-201ENST00000605519 182 ntBASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 MIR664A-201ENST00000626086 82 ntBASIC1.17□□□□□ -2.22
SEC61A2Q9H9S3 RNY4P3-201ENST00000365254 95 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 SNORD26-201ENST00000384147 75 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 RNU7-104P-201ENST00000459398 79 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 SNORD124-201ENST00000459577 104 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 RNU7-13P-201ENST00000516413 62 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 RNU7-161P-201ENST00000517289 62 ntBASIC1.16□□□□□ -2.22
SEC61A2Q9H9S3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 RNA5SP117-201ENST00000365294 118 ntBASIC1.15□□□□□ -2.23
SEC61A2Q9H9S3 Y_RNA.545-201ENST00000384652 105 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms