Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AP002392.1-201ENST00000537692 208 ntBASIC-1.11□□□□□ -2.59
VCX3BQ9H321 uc_338.19-201ENST00000616808 99 ntBASIC-1.11□□□□□ -2.59
VCX3BQ9H321 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 RNU6-431P-201ENST00000383874 107 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 MIR451A-201ENST00000385059 72 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 AL353813.1-201ENST00000440700 253 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 SNORD42B-201ENST00000458893 67 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 snoU13.11-201ENST00000459219 104 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.12□□□□□ -2.59
VCX3BQ9H321 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.12□□□□□ -2.59
VCX3BQ9H321 AC108676.2-201ENST00000605225 163 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 MIR6773-201ENST00000612812 74 ntBASIC-1.12□□□□□ -2.59
VCX3BQ9H321 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 SNORD115-23-201ENST00000364461 82 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 SNORD18B-201ENST00000365659 72 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 SNORD64-201ENST00000386683 67 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 MIR548G-201ENST00000408442 89 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 RNU6-588P-201ENST00000410281 105 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 RNU4-63P-201ENST00000411313 118 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 AC107027.2-201ENST00000512197 115 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 MIR3681-201ENST00000580089 72 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 MIR3163-201ENST00000581592 73 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 MIR4499-201ENST00000584834 69 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 snoR1.1-201ENST00000628177 80 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 U6.104-201ENST00000637979 90 ntBASIC-1.13□□□□□ -2.59
VCX3BQ9H321 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.14□□□□□ -2.59
VCX3BQ9H321 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.14□□□□□ -2.59
VCX3BQ9H321 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.14□□□□□ -2.59
VCX3BQ9H321 MIR548P-201ENST00000408336 84 ntBASIC-1.14□□□□□ -2.59
VCX3BQ9H321 AL160413.1-201ENST00000622780 310 ntBASIC-1.14□□□□□ -2.59
VCX3BQ9H321 AC134503.1-201ENST00000633048 54 ntBASIC-1.14□□□□□ -2.59
VCX3BQ9H321 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 Y_RNA.138-201ENST00000363462 102 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 SNORD38.1-201ENST00000363863 68 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 MIR147A-201ENST00000385079 72 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 MIRLET7B-201ENST00000385140 83 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 MIR1302-6-201ENST00000408466 90 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 RNU6-985P-201ENST00000410182 104 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 SNORA7.5-201ENST00000410672 110 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 Z95118.1-201ENST00000421372 247 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 AC140658.3-201ENST00000567603 271 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 MIR3646-201ENST00000578301 84 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 RNU6-90P-201ENST00000606352 106 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 MIR6844-201ENST00000637122 62 ntBASIC-1.15□□□□□ -2.59
VCX3BQ9H321 RNU6-337P-201ENST00000391243 106 ntBASIC-1.16□□□□□ -2.6
VCX3BQ9H321 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.16□□□□□ -2.6
VCX3BQ9H321 AP001328.1-201ENST00000528550 176 ntBASIC-1.16□□□□□ -2.6
VCX3BQ9H321 MIR8062-201ENST00000621515 85 ntBASIC-1.16□□□□□ -2.6
VCX3BQ9H321 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 U3.27-201ENST00000391237 200 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 AC022028.1-201ENST00000412054 408 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 SCARNA18B-201ENST00000458806 135 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 SNORD127-201ENST00000458892 86 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 IGKV1-22-201ENST00000524313 326 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 AC021753.1-201ENST00000635724 168 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 MIR382-201ENST00000637119 76 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 AL512310.12-203ENST00000640543 90 ntBASIC-1.17□□□□□ -2.6
VCX3BQ9H321 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.18□□□□□ -2.6
VCX3BQ9H321 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.18□□□□□ -2.6
VCX3BQ9H321 RNU6-274P-201ENST00000459566 107 ntBASIC-1.18□□□□□ -2.6
VCX3BQ9H321 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.18□□□□□ -2.6
VCX3BQ9H321 RNU6-75P-201ENST00000515944 104 ntBASIC-1.18□□□□□ -2.6
VCX3BQ9H321 MIR3658-201ENST00000636291 56 ntBASIC-1.18□□□□□ -2.6
VCX3BQ9H321 SNORD95.1-201ENST00000364099 68 ntBASIC-1.19□□□□□ -2.6
VCX3BQ9H321 SNORA63.6-201ENST00000364921 119 ntBASIC-1.19□□□□□ -2.6
VCX3BQ9H321 SNORD18.2-201ENST00000459604 70 ntBASIC-1.19□□□□□ -2.6
VCX3BQ9H321 SCARNA17-201ENST00000516183 144 ntBASIC-1.19□□□□□ -2.6
VCX3BQ9H321 MIR548S-201ENST00000581352 82 ntBASIC-1.19□□□□□ -2.6
VCX3BQ9H321 MIR3171-201ENST00000584270 74 ntBASIC-1.19□□□□□ -2.6
VCX3BQ9H321 RNU6-647P-201ENST00000364243 107 ntBASIC-1.2□□□□□ -2.6
VCX3BQ9H321 RNA5SP368-201ENST00000364298 116 ntBASIC-1.2□□□□□ -2.6
VCX3BQ9H321 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.2□□□□□ -2.6
VCX3BQ9H321 MIR548H3-201ENST00000408771 118 ntBASIC-1.2□□□□□ -2.6
VCX3BQ9H321 MTND2P23-201ENST00000422990 651 ntBASIC-1.2□□□□□ -2.6
VCX3BQ9H321 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 RNU6-918P-201ENST00000391219 106 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 RNU2-38P-201ENST00000410856 79 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 RNU6-635P-201ENST00000516651 102 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 AC020661.2-201ENST00000560114 134 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 MIR7111-201ENST00000619751 72 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.21□□□□□ -2.6
VCX3BQ9H321 SNORD114-17-201ENST00000364699 75 ntBASIC-1.22□□□□□ -2.6
VCX3BQ9H321 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.22□□□□□ -2.6
VCX3BQ9H321 MIR759-201ENST00000390224 91 ntBASIC-1.22□□□□□ -2.6
VCX3BQ9H321 RNU6-138P-201ENST00000515952 107 ntBASIC-1.22□□□□□ -2.6
VCX3BQ9H321 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.22□□□□□ -2.6
VCX3BQ9H321 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 MIR7-2-201ENST00000384970 110 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 MIR124-2-201ENST00000385081 109 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 MTATP8P1-201ENST00000467115 207 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 FGF7P7-201ENST00000514120 227 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms