Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR377-201ENST00000362145 69 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU1-23P-201ENST00000363361 144 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 Y_RNA.129-201ENST00000363392 110 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORD115-24-201ENST00000363528 82 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-1169P-201ENST00000363537 103 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORA64-201ENST00000384674 134 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR520D-201ENST00000385002 87 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RN7SKP223-201ENST00000410582 62 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU1-123P-201ENST00000458950 160 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP233-201ENST00000459153 113 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU7-185P-201ENST00000459215 60 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU7-170P-201ENST00000459303 61 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU7-104P-201ENST00000459398 79 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP470-201ENST00000516463 106 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 Y_RNA.699-201ENST00000516803 93 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-1174P-201ENST00000517278 101 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR4524B-201ENST00000581569 115 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR4512-201ENST00000583257 77 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 RMST_2.1-201ENST00000617263 136 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.81□□□□□ -2.28
KRTAP4-3Q9BYR4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 AP001486.2-201ENST00000561652 5113 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 Y_RNA.99-201ENST00000363138 105 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORA70B-201ENST00000384210 135 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-1072P-201ENST00000384703 107 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-443P-201ENST00000384780 107 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR656-201ENST00000385224 78 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR652-201ENST00000385278 98 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-337P-201ENST00000391243 106 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR548N-201ENST00000408742 75 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-321P-201ENST00000410912 106 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 snoU13.28-201ENST00000459235 104 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU7-23P-201ENST00000459465 62 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 U7.5-201ENST00000517224 61 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP169-201ENST00000517268 117 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR5194-201ENST00000582634 120 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 AL645939.4-201ENST00000604495 135 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 AC021506.2-201ENST00000612354 169 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 AC002076.2-201ENST00000617362 122 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR7843-201ENST00000622274 79 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 AC022513.1-201ENST00000624512 117 ntBASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-3Q9BYR4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 Y_RNA.53-201ENST00000362765 102 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP99-201ENST00000364020 114 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU1-141P-201ENST00000364623 158 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR592-201ENST00000384959 97 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 AC003685.2-201ENST00000422795 395 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU7-88P-201ENST00000458752 63 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 AC099513.1-201ENST00000490423 301 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP402-201ENST00000517148 110 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP106-201ENST00000517274 100 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 AC013734.1-201ENST00000619329 111 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 AP001005.3-201ENST00000622049 129 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 AC067863.3-201ENST00000624172 122 ntBASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 WARS-244ENST00000627608 123 ntTSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC0.79□□□□□ -2.28
KRTAP4-3Q9BYR4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 Y_RNA.79-201ENST00000362992 113 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP456-201ENST00000364002 114 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 RNA5SP493-201ENST00000364115 91 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORD60-201ENST00000383903 83 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORA25-201ENST00000384384 134 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 RNU6-422P-201ENST00000384632 107 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR221-201ENST00000385135 110 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 BX510359.4-201ENST00000423750 193 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 AL603825.1-201ENST00000438481 80 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 SNORD111.1-201ENST00000516421 86 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR3169-201ENST00000578032 83 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR4432-201ENST00000581823 84 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 AL137847.3-201ENST00000611521 109 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC0.78□□□□□ -2.28
KRTAP4-3Q9BYR4 MIR1291-201ENST00000627649 87 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms