Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 SNORD36A-201ENST00000362874 73 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 SNORD38.1-201ENST00000363863 68 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 U8.6-201ENST00000364939 135 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.507-201ENST00000384500 99 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 MIR548A3-201ENST00000385297 97 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 MIR548G-201ENST00000408442 89 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 TMSB4XP3-201ENST00000445144 114 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 SPINT5P-201ENST00000448174 155 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 AC097635.1-201ENST00000450678 155 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 MTND5P40-201ENST00000559945 246 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 AC067863.3-201ENST00000624172 122 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 U6.95-201ENST00000636931 70 ntBASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 RNU6-524P-201ENST00000384270 107 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 RNU6-22P-201ENST00000384355 107 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 MIR1912-201ENST00000410389 80 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 SNORD71-201ENST00000411292 86 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 AL161932.1-201ENST00000437408 146 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 RNU7-104P-201ENST00000459398 79 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 HAR1A.1-201ENST00000459583 118 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 MIR5009-201ENST00000578736 100 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 AL670379.3-201ENST00000605040 251 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 RNU6-90P-201ENST00000606352 106 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 RNU7-10P-201ENST00000607194 63 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 MIR6718-201ENST00000616153 80 ntBASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.19□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.281-201ENST00000364774 94 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.309-201ENST00000365046 111 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1168P-201ENST00000390831 104 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 SNORD41.1-201ENST00000391000 69 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 RNU6-269P-201ENST00000391077 97 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 AL603908.1-201ENST00000406098 201 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 MIR548AG2-201ENST00000581228 64 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 MIR3920-201ENST00000581751 86 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 SNORA70.25-201ENST00000612741 95 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 AL162376.1-201ENST00000624117 175 ntBASIC0.18□□□□□ -2.38
RSPO3Q9BXY4 RNU6-832P-201ENST00000363319 107 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 RNA5SP205-201ENST00000364653 136 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.323-201ENST00000365157 109 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.377-201ENST00000365644 108 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 SNORD116-21-201ENST00000384507 92 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 AC109327.2-201ENST00000448339 378 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 MIR4694-201ENST00000578534 80 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 MIR548Z-201ENST00000584743 97 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
RSPO3Q9BXY4 Y_RNA.57-201ENST00000362806 113 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 RNY3P2-201ENST00000362918 102 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 SNORD113-1-201ENST00000365321 69 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 SNORD38.2-201ENST00000384470 69 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 MIR181B2-201ENST00000385004 89 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1254P-201ENST00000391266 104 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 SNORA19.1-201ENST00000410656 129 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 AC008267.6-201ENST00000441664 139 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 RNU6-86P-201ENST00000606534 107 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 MIR6759-201ENST00000638110 65 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 AC132825.6-201ENST00000638861 357 ntBASIC0.16□□□□□ -2.38
RSPO3Q9BXY4 RNU6-1107P-201ENST00000364817 104 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1014P-201ENST00000383940 103 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1144P-201ENST00000384247 104 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1117P-201ENST00000384525 104 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 MIR5190-201ENST00000581537 80 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 MIR6129-201ENST00000616087 109 ntBASIC0.15□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1244P-201ENST00000363614 108 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 RNU6-957P-201ENST00000363652 99 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 SNORA2A-201ENST00000383885 135 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.467-201ENST00000384297 102 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 RNU6-476P-201ENST00000384726 107 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 MIR548L-201ENST00000408303 86 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 AL606753.1-201ENST00000427435 87 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 AC073261.1-201ENST00000429409 121 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 snoU13.11-201ENST00000459219 104 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 U6.100-201ENST00000636230 99 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 MIR499B-201ENST00000636498 73 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 MIR6086-201ENST00000638065 55 ntBASIC0.14□□□□□ -2.39
RSPO3Q9BXY4 RNU6-880P-201ENST00000384526 107 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1154P-201ENST00000391001 104 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 RNU6-243P-201ENST00000391140 107 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 RNU6-1064P-201ENST00000410626 104 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 AC141557.1-201ENST00000540982 400 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 MIR4777-201ENST00000583710 86 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 uc_338.28-201ENST00000612082 187 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 AC025521.1-201ENST00000621624 286 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 TRDV1-202ENST00000621643 102 ntBASIC0.13□□□□□ -2.39
RSPO3Q9BXY4 Y_RNA.163-201ENST00000363702 113 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms