Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 Y_RNA.495-201ENST00000384435 112 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 SNORD38.2-201ENST00000384470 69 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 RNU6-813P-201ENST00000384691 107 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 RNA5SP89-201ENST00000410300 108 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.809-201ENST00000516058 95 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 SCARNA16.5-201ENST00000517114 183 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 MIR7107-201ENST00000611489 80 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.93-201ENST00000363066 109 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.107-201ENST00000363190 121 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 RNU6-957P-201ENST00000363652 99 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 RNA5SP117-201ENST00000365294 118 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 RNU6-524P-201ENST00000384270 107 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 SNORA8.2-201ENST00000384372 139 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 RNU6-1254P-201ENST00000391266 104 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 MIR3920-201ENST00000581751 86 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 U6.100-201ENST00000636230 99 ntBASIC0.41□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.4-201ENST00000362333 112 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 RNU4-45P-201ENST00000365469 141 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 SNORD58A-201ENST00000383875 65 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 SNORD41.1-201ENST00000391000 69 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
ZIM3Q96PE6 RNU6-168P-201ENST00000516189 101 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 AC096720.1-201ENST00000604441 183 ntBASIC0.4□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.10-201ENST00000362371 110 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-1298P-201ENST00000362456 101 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.190-201ENST00000363964 101 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.283-201ENST00000364798 112 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-32P-201ENST00000383948 107 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 SNORA36.2-201ENST00000384004 127 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-13P-201ENST00000384248 107 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-12P-201ENST00000384604 107 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.544-201ENST00000384650 113 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-41P-201ENST00000384741 107 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RPS29P1-201ENST00000465274 159 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 SNORA25.18-201ENST00000607153 114 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU7-10P-201ENST00000607194 63 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 U7.3-201ENST00000616123 62 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 TRDV1-202ENST00000621643 102 ntBASIC0.39□□□□□ -2.35
ZIM3Q96PE6 RNU6-887P-201ENST00000410660 100 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.38□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.648-201ENST00000459455 110 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 RNU6-162P-201ENST00000516228 103 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 RNU6-135P-201ENST00000516769 101 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 RNA5SP268-201ENST00000516828 124 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 Y_RNA.705-201ENST00000516862 110 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 MIR6755-201ENST00000619993 66 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 AL162376.1-201ENST00000624117 175 ntBASIC0.38□□□□□ -2.35
ZIM3Q96PE6 RNU6-497P-201ENST00000365316 104 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 RNU6-49P-201ENST00000384256 107 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 RNU6-1113P-201ENST00000384348 107 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.37□□□□□ -2.35
ZIM3Q96PE6 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 SNORD4B-201ENST00000459083 72 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 RNU7-104P-201ENST00000459398 79 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 MALAT1.1-201ENST00000618249 95 ntBASIC0.37□□□□□ -2.35
ZIM3Q96PE6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.37□□□□□ -2.35
ZIM3Q96PE6 RNU6-1125P-201ENST00000363601 107 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 RNU6-132P-201ENST00000383863 107 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 RNU6-480P-201ENST00000384332 107 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 RNY1P7-201ENST00000384743 110 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 RNU6-972P-201ENST00000391208 107 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 AC093423.1-201ENST00000440817 142 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 MIR6504-201ENST00000613520 61 ntBASIC0.36□□□□□ -2.35
ZIM3Q96PE6 RNU6-269P-201ENST00000391077 97 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 RNU6-243P-201ENST00000391140 107 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 AC069271.1-201ENST00000445577 156 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 AC026421.1-201ENST00000519101 163 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 MIR4752-201ENST00000579672 72 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 MIR4696-201ENST00000581431 70 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
ZIM3Q96PE6 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 MIR519E-201ENST00000385075 84 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 SNORD90-201ENST00000391145 111 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 MIR548J-201ENST00000408833 112 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 RNU6-469P-201ENST00000516253 101 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 SNORA40.13-201ENST00000516379 120 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.677-201ENST00000516401 85 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.34□□□□□ -2.36
ZIM3Q96PE6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 MIR8070-201ENST00000616510 88 ntBASIC0.34□□□□□ -2.36
ZIM3Q96PE6 MIR103A1-201ENST00000362165 78 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 SNORD116-10-201ENST00000363791 102 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 Y_RNA.207-201ENST00000364142 106 ntBASIC0.33□□□□□ -2.36
ZIM3Q96PE6 SNORD115-27-201ENST00000364430 82 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms