Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR1302-2-201ENST00000607096 138 ntBASIC-1.94□□□□□ -2.72
AP1S3Q96PC3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.94□□□□□ -2.72
AP1S3Q96PC3 MIR1255B1-201ENST00000636325 63 ntBASIC-1.94□□□□□ -2.72
AP1S3Q96PC3 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 RNU6-806P-201ENST00000365147 105 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 RNU7-6P-201ENST00000516845 62 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 RNU6-90P-201ENST00000606352 106 ntBASIC-1.95□□□□□ -2.72
AP1S3Q96PC3 RNU6-103P-201ENST00000363686 107 ntBASIC-1.96□□□□□ -2.72
AP1S3Q96PC3 RNU6-578P-201ENST00000390980 103 ntBASIC-1.96□□□□□ -2.72
AP1S3Q96PC3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.96□□□□□ -2.72
AP1S3Q96PC3 AC113618.1-201ENST00000416747 285 ntBASIC-1.96□□□□□ -2.72
AP1S3Q96PC3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 SNORD115-19-201ENST00000363098 82 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 SNORD115-18-201ENST00000363293 82 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 SNORD115-17-201ENST00000364612 82 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 RNU6-643P-201ENST00000384018 107 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 MIR548F1-201ENST00000408667 84 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 FGF7P4-201ENST00000509595 295 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 AC107027.2-201ENST00000512197 115 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 RNU6-718P-201ENST00000516166 105 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.97□□□□□ -2.72
AP1S3Q96PC3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 SNORD116-1-201ENST00000384335 95 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 ELOCP20-201ENST00000422460 345 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 RNU7-152P-201ENST00000458982 64 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 MTND3P22-201ENST00000510932 243 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 MIR3140-201ENST00000583685 90 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 MIR1246-201ENST00000636535 73 ntBASIC-1.98□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.99□□□□□ -2.73
AP1S3Q96PC3 MIR1277-201ENST00000408536 78 ntBASIC-1.99□□□□□ -2.73
AP1S3Q96PC3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.99□□□□□ -2.73
AP1S3Q96PC3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.99□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.83-201ENST00000363005 113 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 SNORA2.1-201ENST00000363089 137 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.162-201ENST00000363683 102 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 RNU6-450P-201ENST00000364654 107 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 MIR1255B2-201ENST00000408618 67 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 SNORA7.5-201ENST00000410672 110 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 MTND5P22-201ENST00000458380 195 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 RNU6-412P-201ENST00000516434 106 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.688-201ENST00000516565 95 ntBASIC-2□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 RNU6-164P-201ENST00000364604 103 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 SNORA63.7-201ENST00000365579 123 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 AC022028.1-201ENST00000412054 408 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 RNU6-277P-201ENST00000516272 106 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 AC080013.6-201ENST00000606185 215 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.01□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 SNORD38.1-201ENST00000363863 68 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 MIR507-201ENST00000385234 94 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 AP002795.1-201ENST00000534879 84 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 U4.5-201ENST00000617137 123 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 AL512310.12-203ENST00000640543 90 ntBASIC-2.02□□□□□ -2.73
AP1S3Q96PC3 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 RNU6-770P-201ENST00000363929 105 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 RNU6-309P-201ENST00000364573 106 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 SNORA33.1-201ENST00000364957 130 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 RNU6-823P-201ENST00000391042 103 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 MIR4282-201ENST00000583613 67 ntBASIC-2.03□□□□□ -2.73
AP1S3Q96PC3 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.04□□□□□ -2.74
AP1S3Q96PC3 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.04□□□□□ -2.74
AP1S3Q96PC3 SNORA24B-201ENST00000384176 131 ntBASIC-2.04□□□□□ -2.74
AP1S3Q96PC3 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.04□□□□□ -2.74
AP1S3Q96PC3 RNY3P15-201ENST00000516297 97 ntBASIC-2.04□□□□□ -2.74
AP1S3Q96PC3 RNU6-132P-201ENST00000383863 107 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 RNU6-768P-201ENST00000384683 107 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 MIR1285-2-201ENST00000408311 88 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 MIR1252-201ENST00000408861 65 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 RNA5SP266-201ENST00000410273 108 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 MTATP6P21-201ENST00000440681 189 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 FGF7P6-202ENST00000451282 293 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 RNU6-976P-201ENST00000516086 111 ntBASIC-2.05□□□□□ -2.74
AP1S3Q96PC3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms