Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORA3B-201ENST00000391305 131 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 AC007012.1-201ENST00000567192 175 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 AC008737.2-201ENST00000599446 118 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.92□□□□□ -2.56
RPRD1AQ96P16 MIR20A-201ENST00000362279 71 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 SNORD114-14-201ENST00000362723 75 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 MIR606-201ENST00000384851 96 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 RNU6-243P-201ENST00000391140 107 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 snoU13.19-201ENST00000459148 104 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 MIR3128-201ENST00000581957 66 ntBASIC-0.93□□□□□ -2.56
RPRD1AQ96P16 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 AC074198.2-201ENST00000508153 258 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 RNU7-121P-201ENST00000516604 62 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 MIR1255B1-201ENST00000636325 63 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 AC093726.3-201ENST00000637588 150 ntBASIC-0.94□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 RNU6-111P-201ENST00000517179 105 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 AP000676.1-201ENST00000533307 52 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 MIR3163-201ENST00000581592 73 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 AC021753.1-201ENST00000635724 168 ntBASIC-0.95□□□□□ -2.56
RPRD1AQ96P16 MIR652-201ENST00000385278 98 ntBASIC-0.96□□□□□ -2.56
RPRD1AQ96P16 AC244090.1-201ENST00000441884 93 ntBASIC-0.96□□□□□ -2.56
RPRD1AQ96P16 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.96□□□□□ -2.56
RPRD1AQ96P16 AC022559.1-201ENST00000520905 205 ntBASIC-0.96□□□□□ -2.56
RPRD1AQ96P16 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.96□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 RNU6-957P-201ENST00000363652 99 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 RNU4-63P-201ENST00000411313 118 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 AL445193.1-201ENST00000441183 141 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 SPINT5P-201ENST00000448174 155 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 IGKV1-22-201ENST00000524313 326 ntBASIC-0.97□□□□□ -2.56
RPRD1AQ96P16 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.98□□□□□ -2.57
RPRD1AQ96P16 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.98□□□□□ -2.57
RPRD1AQ96P16 RNU6-900P-201ENST00000384498 102 ntBASIC-0.98□□□□□ -2.57
RPRD1AQ96P16 U4.1-201ENST00000620349 87 ntBASIC-0.98□□□□□ -2.57
RPRD1AQ96P16 SNORD56B-201ENST00000384713 71 ntBASIC-0.99□□□□□ -2.57
RPRD1AQ96P16 SNORA7.5-201ENST00000410672 110 ntBASIC-0.99□□□□□ -2.57
RPRD1AQ96P16 MIR548AX-201ENST00000580117 73 ntBASIC-0.99□□□□□ -2.57
RPRD1AQ96P16 Y_RNA.78-201ENST00000362970 110 ntBASIC-1□□□□□ -2.57
RPRD1AQ96P16 SNORA49-201ENST00000386157 136 ntBASIC-1□□□□□ -2.57
RPRD1AQ96P16 RNU6-1133P-201ENST00000410963 100 ntBASIC-1□□□□□ -2.57
RPRD1AQ96P16 MTCYBP9-201ENST00000431021 303 ntBASIC-1□□□□□ -2.57
RPRD1AQ96P16 RNU6-1023P-201ENST00000516137 106 ntBASIC-1□□□□□ -2.57
RPRD1AQ96P16 RNU6-738P-201ENST00000384531 106 ntBASIC-1.01□□□□□ -2.57
RPRD1AQ96P16 RNU6-30P-201ENST00000384561 107 ntBASIC-1.01□□□□□ -2.57
RPRD1AQ96P16 MIR548G-201ENST00000408442 89 ntBASIC-1.01□□□□□ -2.57
RPRD1AQ96P16 AP001328.1-201ENST00000528550 176 ntBASIC-1.01□□□□□ -2.57
RPRD1AQ96P16 AC145423.2-201ENST00000610631 239 ntBASIC-1.01□□□□□ -2.57
RPRD1AQ96P16 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 RNU6-901P-201ENST00000384593 106 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 MIR568-201ENST00000385036 95 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 AC062037.2-201ENST00000610137 73 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 AL512310.12-203ENST00000640543 90 ntBASIC-1.02□□□□□ -2.57
RPRD1AQ96P16 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 SNORA20.1-201ENST00000364790 130 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 MIR196A1-201ENST00000388006 70 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 MIR3121-201ENST00000579680 77 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 RNU6-90P-201ENST00000606352 106 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 MIR548O2-201ENST00000616090 70 ntBASIC-1.03□□□□□ -2.57
RPRD1AQ96P16 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 SNORD38.1-201ENST00000363863 68 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 SNORD101-201ENST00000384027 73 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 AL353813.1-201ENST00000440700 253 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 RNU6-138P-201ENST00000515952 107 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 MIR4696-201ENST00000581431 70 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 MIR4280-201ENST00000582178 76 ntBASIC-1.04□□□□□ -2.58
RPRD1AQ96P16 SNORD115-25-201ENST00000362619 82 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 snoU13.13-201ENST00000458842 104 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 AC130289.1-201ENST00000577321 73 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.05□□□□□ -2.58
RPRD1AQ96P16 RNU6-664P-201ENST00000362381 107 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 MIR204-201ENST00000385200 110 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 MIR216B-201ENST00000390186 82 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 RNU6-466P-201ENST00000391224 103 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 MIR1302-3-201ENST00000408128 138 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms