Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 FTX_2.1-201ENST00000618816 94 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 AC084368.1-201ENST00000620935 65 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 MIR6514-201ENST00000622549 70 ntBASIC-0.21□□□□□ -2.44
VPS39Q96JC1 RNU6-363P-201ENST00000362895 105 ntBASIC-0.22□□□□□ -2.44
VPS39Q96JC1 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
VPS39Q96JC1 RNU6V-201ENST00000384105 107 ntBASIC-0.22□□□□□ -2.44
VPS39Q96JC1 MIR892B-201ENST00000401279 77 ntBASIC-0.22□□□□□ -2.44
VPS39Q96JC1 SNORD36A-201ENST00000362874 73 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 snosnR66.1-201ENST00000391095 99 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 AC093423.1-201ENST00000440817 142 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 RNU6-287P-201ENST00000516230 98 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 SNORA25.13-201ENST00000516395 103 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 U7.2-201ENST00000607576 63 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 AC090425.1-201ENST00000610007 140 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 U6.100-201ENST00000636230 99 ntBASIC-0.23□□□□□ -2.45
VPS39Q96JC1 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 SNORA51.5-201ENST00000384126 131 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 SNORD38.2-201ENST00000384470 69 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 MIR548G-201ENST00000408442 89 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.24□□□□□ -2.45
VPS39Q96JC1 MIR2113-201ENST00000459007 91 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 YWHAEP2-201ENST00000580066 112 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 TRDV1-202ENST00000621643 102 ntBASIC-0.24□□□□□ -2.45
VPS39Q96JC1 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 RNU6-957P-201ENST00000363652 99 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 MIR617-201ENST00000385030 97 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 RNU6-243P-201ENST00000391140 107 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 MIR548AE1-201ENST00000583292 70 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 RNU6-90P-201ENST00000606352 106 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 AC025166.1-201ENST00000612411 163 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 MTND5P18-201ENST00000445624 1801 ntBASIC-0.25□□□□□ -2.45
VPS39Q96JC1 SNORD58C-201ENST00000365223 64 ntBASIC-0.26□□□□□ -2.45
VPS39Q96JC1 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.26□□□□□ -2.45
VPS39Q96JC1 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.26□□□□□ -2.45
VPS39Q96JC1 MIR876-201ENST00000401147 81 ntBASIC-0.26□□□□□ -2.45
VPS39Q96JC1 MTND4LP9-201ENST00000427694 174 ntBASIC-0.26□□□□□ -2.45
VPS39Q96JC1 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.27□□□□□ -2.45
VPS39Q96JC1 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.27□□□□□ -2.45
VPS39Q96JC1 RNU6-409P-201ENST00000384114 104 ntBASIC-0.27□□□□□ -2.45
VPS39Q96JC1 SNORA75.1-201ENST00000391130 148 ntBASIC-0.27□□□□□ -2.45
VPS39Q96JC1 RNU7-74P-201ENST00000459104 62 ntBASIC-0.27□□□□□ -2.45
VPS39Q96JC1 RNU6-346P-201ENST00000516288 111 ntBASIC-0.27□□□□□ -2.45
VPS39Q96JC1 SNORD38.1-201ENST00000363863 68 ntBASIC-0.28□□□□□ -2.45
VPS39Q96JC1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
VPS39Q96JC1 RNU6-816P-201ENST00000390914 107 ntBASIC-0.28□□□□□ -2.45
VPS39Q96JC1 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.28□□□□□ -2.45
VPS39Q96JC1 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.28□□□□□ -2.45
VPS39Q96JC1 RNU7-188P-201ENST00000517063 64 ntBASIC-0.28□□□□□ -2.45
VPS39Q96JC1 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.29□□□□□ -2.46
VPS39Q96JC1 MIR329-2-201ENST00000385029 84 ntBASIC-0.29□□□□□ -2.46
VPS39Q96JC1 MIR4460-201ENST00000577862 86 ntBASIC-0.29□□□□□ -2.46
VPS39Q96JC1 AC069503.3-201ENST00000618674 145 ntBASIC-0.29□□□□□ -2.46
VPS39Q96JC1 MIR1295B-201ENST00000636144 60 ntBASIC-0.29□□□□□ -2.46
VPS39Q96JC1 RNY4P6-201ENST00000363667 96 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 SNORD115-44-201ENST00000365391 82 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 MIR181B2-201ENST00000385004 89 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.3□□□□□ -2.46
VPS39Q96JC1 RNU7-200P-201ENST00000516105 62 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 CR383656.4-201ENST00000546909 122 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 AL442128.1-201ENST00000615151 90 ntBASIC-0.3□□□□□ -2.46
VPS39Q96JC1 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 U8.6-201ENST00000364939 135 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 RNU6-257P-201ENST00000410238 98 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 RNU7-107P-201ENST00000459121 61 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 snoU13.11-201ENST00000459219 104 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 RNU6-255P-201ENST00000516957 105 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 uc_338.10-201ENST00000621872 182 ntBASIC-0.31□□□□□ -2.46
VPS39Q96JC1 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.32□□□□□ -2.46
VPS39Q96JC1 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.32□□□□□ -2.46
VPS39Q96JC1 MIR6507-201ENST00000613630 70 ntBASIC-0.32□□□□□ -2.46
VPS39Q96JC1 AL035470.1-201ENST00000622571 220 ntBASIC-0.32□□□□□ -2.46
VPS39Q96JC1 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 MT-TY-201ENST00000387409 66 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 RNU6-772P-201ENST00000516042 105 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.33□□□□□ -2.46
VPS39Q96JC1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 AL162726.3-218ENST00000636401 95 ntBASIC-0.33□□□□□ -2.46
VPS39Q96JC1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.33□□□□□ -2.46
VPS39Q96JC1 MIR577-201ENST00000385196 96 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 MIR214-201ENST00000385214 110 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 SNORD4A-201ENST00000459174 72 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 AC104692.1-201ENST00000472406 90 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 MIR4696-201ENST00000581431 70 ntBASIC-0.34□□□□□ -2.46
VPS39Q96JC1 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms