Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR198-201ENST00000637333 62 ntBASIC-0.9□□□□□ -2.55
ECHDC3Q96DC8 MIR20A-201ENST00000362279 71 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 RNU6-309P-201ENST00000364573 106 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 RNU6-47P-201ENST00000383866 107 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 AC107027.2-201ENST00000512197 115 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 AC093726.3-201ENST00000637588 150 ntBASIC-0.91□□□□□ -2.56
ECHDC3Q96DC8 SNORD115-19-201ENST00000363098 82 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 SNORD115-18-201ENST00000363293 82 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 SNORD115-17-201ENST00000364612 82 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 RNU6-900P-201ENST00000384498 102 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 RNU6-588P-201ENST00000410281 105 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 MIR3165-201ENST00000579874 75 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 TRDV1-202ENST00000621643 102 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 MIR6844-201ENST00000637122 62 ntBASIC-0.92□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 SNORD36A-201ENST00000362874 73 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 RNY1P11-201ENST00000363759 113 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 RNU6-312P-201ENST00000364629 107 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 AC244090.1-201ENST00000441884 93 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 AL137067.1-201ENST00000615933 120 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 U6.100-201ENST00000636230 99 ntBASIC-0.93□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 SNORD38.2-201ENST00000384470 69 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 RNA5SP180-201ENST00000516181 101 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 RNU6-521P-201ENST00000516663 105 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 AC108081.1-201ENST00000604358 221 ntBASIC-0.94□□□□□ -2.56
ECHDC3Q96DC8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.95□□□□□ -2.56
ECHDC3Q96DC8 AL500527.2-201ENST00000454105 95 ntBASIC-0.95□□□□□ -2.56
ECHDC3Q96DC8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.95□□□□□ -2.56
ECHDC3Q96DC8 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.95□□□□□ -2.56
ECHDC3Q96DC8 SNORD27-201ENST00000363981 72 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 SNORD18B-201ENST00000365659 72 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 MIR652-201ENST00000385278 98 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 RNA5SP169-201ENST00000517268 117 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 MIR4280-201ENST00000582178 76 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 MIR4499-201ENST00000584834 69 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 AC145423.2-201ENST00000610631 239 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.96□□□□□ -2.56
ECHDC3Q96DC8 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 SNORD56B-201ENST00000384713 71 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 MT-TI-201ENST00000387365 69 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 AL161932.1-201ENST00000437408 146 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 RNU7-121P-201ENST00000516604 62 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 MIR4723-201ENST00000585070 81 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.97□□□□□ -2.56
ECHDC3Q96DC8 SNORA49-201ENST00000386157 136 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 RNU6-243P-201ENST00000391140 107 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 RNU6-274P-201ENST00000459566 107 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 RNU7-6P-201ENST00000516845 62 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 AC044792.1-201ENST00000593294 196 ntBASIC-0.98□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.99□□□□□ -2.57
ECHDC3Q96DC8 RNU7-55P-201ENST00000459426 62 ntBASIC-0.99□□□□□ -2.57
ECHDC3Q96DC8 RNU6-158P-201ENST00000517104 100 ntBASIC-0.99□□□□□ -2.57
ECHDC3Q96DC8 AL117187.1-201ENST00000555482 181 ntBASIC-0.99□□□□□ -2.57
ECHDC3Q96DC8 MIR4306-201ENST00000583390 91 ntBASIC-0.99□□□□□ -2.57
ECHDC3Q96DC8 U4.1-201ENST00000620349 87 ntBASIC-0.99□□□□□ -2.57
ECHDC3Q96DC8 MIR365A-201ENST00000362260 87 ntBASIC-1□□□□□ -2.57
ECHDC3Q96DC8 MIR1285-2-201ENST00000408311 88 ntBASIC-1□□□□□ -2.57
ECHDC3Q96DC8 RNU4-71P-201ENST00000516258 113 ntBASIC-1□□□□□ -2.57
ECHDC3Q96DC8 AP000676.1-201ENST00000533307 52 ntBASIC-1□□□□□ -2.57
ECHDC3Q96DC8 uc_338.19-201ENST00000616808 99 ntBASIC-1□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.01□□□□□ -2.57
ECHDC3Q96DC8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
ECHDC3Q96DC8 AL445193.1-201ENST00000441183 141 ntBASIC-1.01□□□□□ -2.57
ECHDC3Q96DC8 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.01□□□□□ -2.57
ECHDC3Q96DC8 MIR548O2-201ENST00000616090 70 ntBASIC-1.01□□□□□ -2.57
ECHDC3Q96DC8 RNU6-957P-201ENST00000363652 99 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 MIR216B-201ENST00000390186 82 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 RNU6-239P-201ENST00000390990 99 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 MIR3163-201ENST00000581592 73 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 MIR4441-201ENST00000582623 100 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 MIR6851-201ENST00000617060 67 ntBASIC-1.02□□□□□ -2.57
ECHDC3Q96DC8 RNU6-235P-201ENST00000362644 107 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.03□□□□□ -2.57
ECHDC3Q96DC8 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms