Protein–RNA interactions for Protein: Q96CT2

KLHL29, Kelch-like protein 29, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29Q96CT2 MIR181B2-201ENST00000385004 89 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 MIR516A1-201ENST00000385033 90 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 RNU6-644P-201ENST00000391155 98 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 RNU6-972P-201ENST00000391208 107 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 Y_RNA.705-201ENST00000516862 110 ntBASIC0.6□□□□□ -2.31
KLHL29Q96CT2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
KLHL29Q96CT2 RNU6-640P-201ENST00000363693 105 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 RNU6-905P-201ENST00000384434 107 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 RNU6-887P-201ENST00000410660 100 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.59□□□□□ -2.31
KLHL29Q96CT2 AC244505.6-201ENST00000452829 130 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 RNU7-106P-201ENST00000459514 67 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 RNU7-61P-201ENST00000515897 61 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 MIR5000-201ENST00000577717 103 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 AC103810.7-201ENST00000607821 91 ntBASIC0.59□□□□□ -2.31
KLHL29Q96CT2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.59□□□□□ -2.31
KLHL29Q96CT2 RNU6-1254P-201ENST00000391266 104 ntBASIC0.58□□□□□ -2.32
KLHL29Q96CT2 AC097635.1-201ENST00000450678 155 ntBASIC0.58□□□□□ -2.32
KLHL29Q96CT2 RNU7-195P-201ENST00000458793 62 ntBASIC0.58□□□□□ -2.32
KLHL29Q96CT2 Y_RNA.809-201ENST00000516058 95 ntBASIC0.58□□□□□ -2.32
KLHL29Q96CT2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.58□□□□□ -2.32
KLHL29Q96CT2 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
KLHL29Q96CT2 SNORD36A-201ENST00000362874 73 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 RNU6-1260P-201ENST00000362944 107 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 MIR599-201ENST00000385069 95 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 MIR644A-201ENST00000385262 94 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 RNU6-135P-201ENST00000516769 101 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 AL513043.2-201ENST00000573941 143 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 AC022709.1-201ENST00000615967 87 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 AC025521.1-201ENST00000621624 286 ntBASIC0.57□□□□□ -2.32
KLHL29Q96CT2 SNORD58A-201ENST00000383875 65 ntBASIC0.56□□□□□ -2.32
KLHL29Q96CT2 RNU6-243P-201ENST00000391140 107 ntBASIC0.56□□□□□ -2.32
KLHL29Q96CT2 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
KLHL29Q96CT2 RNU6-469P-201ENST00000516253 101 ntBASIC0.56□□□□□ -2.32
KLHL29Q96CT2 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
KLHL29Q96CT2 U7.3-201ENST00000616123 62 ntBASIC0.56□□□□□ -2.32
KLHL29Q96CT2 SNORD116-10-201ENST00000363791 102 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 RNU6-162P-201ENST00000516228 103 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 RNA5SP94-201ENST00000516917 108 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 MIR3678-201ENST00000578455 94 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 MALAT1.1-201ENST00000618249 95 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 AC092634.7-201ENST00000621022 103 ntBASIC0.55□□□□□ -2.32
KLHL29Q96CT2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
KLHL29Q96CT2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
KLHL29Q96CT2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
KLHL29Q96CT2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.54□□□□□ -2.32
KLHL29Q96CT2 Y_RNA.290-201ENST00000364879 114 ntBASIC0.54□□□□□ -2.32
KLHL29Q96CT2 MIR488-201ENST00000365739 83 ntBASIC0.54□□□□□ -2.32
KLHL29Q96CT2 Y_RNA.694-201ENST00000516677 117 ntBASIC0.54□□□□□ -2.32
KLHL29Q96CT2 MIR4639-201ENST00000584938 69 ntBASIC0.54□□□□□ -2.32
KLHL29Q96CT2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.54□□□□□ -2.32
KLHL29Q96CT2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
KLHL29Q96CT2 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
KLHL29Q96CT2 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
KLHL29Q96CT2 RNU6-524P-201ENST00000384270 107 ntBASIC0.53□□□□□ -2.32
KLHL29Q96CT2 SNORD28-201ENST00000384706 75 ntBASIC0.53□□□□□ -2.32
KLHL29Q96CT2 Y_RNA.648-201ENST00000459455 110 ntBASIC0.53□□□□□ -2.32
KLHL29Q96CT2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
KLHL29Q96CT2 RNA5SP403-201ENST00000363598 108 ntBASIC0.52□□□□□ -2.33
KLHL29Q96CT2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.52□□□□□ -2.33
KLHL29Q96CT2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
KLHL29Q96CT2 RNU6-466P-201ENST00000391224 103 ntBASIC0.52□□□□□ -2.33
KLHL29Q96CT2 snoU13.11-201ENST00000459219 104 ntBASIC0.52□□□□□ -2.33
KLHL29Q96CT2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.52□□□□□ -2.33
KLHL29Q96CT2 Y_RNA.190-201ENST00000363964 101 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 Y_RNA.220-201ENST00000364244 109 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNA5SP517-201ENST00000364724 117 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 Y_RNA.283-201ENST00000364798 112 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNY4P30-201ENST00000410216 95 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNU6-1265P-201ENST00000516342 103 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNA5SP47-201ENST00000517230 109 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNU7-161P-201ENST00000517289 62 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 MIR6515-201ENST00000619843 57 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 AC244669.1-204ENST00000621564 178 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 TRDV1-202ENST00000621643 102 ntBASIC0.51□□□□□ -2.33
KLHL29Q96CT2 RNU6-957P-201ENST00000363652 99 ntBASIC0.5□□□□□ -2.33
KLHL29Q96CT2 AL161932.1-201ENST00000437408 146 ntBASIC0.5□□□□□ -2.33
KLHL29Q96CT2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.5□□□□□ -2.33
KLHL29Q96CT2 RNU6-1298P-201ENST00000362456 101 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 RNU6-1131P-201ENST00000364955 107 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 RNU6-519P-201ENST00000410590 108 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 SNORD71-201ENST00000411292 86 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 RNU7-85P-201ENST00000458851 63 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 SCARNA16.5-201ENST00000517114 183 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 RNA5SP170-201ENST00000517150 101 ntBASIC0.49□□□□□ -2.33
KLHL29Q96CT2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
KLHL29Q96CT2 RNU6-49P-201ENST00000384256 107 ntBASIC0.48□□□□□ -2.33
KLHL29Q96CT2 SNORA8.2-201ENST00000384372 139 ntBASIC0.48□□□□□ -2.33
KLHL29Q96CT2 RNY1P7-201ENST00000384743 110 ntBASIC0.48□□□□□ -2.33
KLHL29Q96CT2 MIR489-201ENST00000384923 84 ntBASIC0.48□□□□□ -2.33
KLHL29Q96CT2 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
KLHL29Q96CT2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms