Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.57-201ENST00000362806 113 ntBASIC0.61□□□□□ -2.31
HPS3Q969F9 Y_RNA.173-201ENST00000363776 113 ntBASIC0.61□□□□□ -2.31
HPS3Q969F9 Y_RNA.629-201ENST00000411368 105 ntBASIC0.61□□□□□ -2.31
HPS3Q969F9 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
HPS3Q969F9 RNU7-195P-201ENST00000458793 62 ntBASIC0.61□□□□□ -2.31
HPS3Q969F9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
HPS3Q969F9 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
HPS3Q969F9 SNORD45B-201ENST00000364617 72 ntBASIC0.6□□□□□ -2.31
HPS3Q969F9 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
HPS3Q969F9 MIR6828-201ENST00000636181 60 ntBASIC0.6□□□□□ -2.31
HPS3Q969F9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 RNU6-1125P-201ENST00000363601 107 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 Y_RNA.163-201ENST00000363702 113 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 RNU6-480P-201ENST00000384332 107 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 MIR516A2-201ENST00000384888 90 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 MIR516A1-201ENST00000385033 90 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 MIR518A1-201ENST00000385068 85 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 RNU6-243P-201ENST00000391140 107 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 MIR1302-5-201ENST00000408164 150 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 MIR548L-201ENST00000408303 86 ntBASIC0.59□□□□□ -2.31
HPS3Q969F9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.58□□□□□ -2.32
HPS3Q969F9 RNU7-106P-201ENST00000459514 67 ntBASIC0.58□□□□□ -2.32
HPS3Q969F9 MIR4439-201ENST00000583746 80 ntBASIC0.58□□□□□ -2.32
HPS3Q969F9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.58□□□□□ -2.32
HPS3Q969F9 AC067863.3-201ENST00000624172 122 ntBASIC0.58□□□□□ -2.32
HPS3Q969F9 SNORD118-201ENST00000363593 134 ntBASIC0.57□□□□□ -2.32
HPS3Q969F9 RNA5SP193-201ENST00000410353 107 ntBASIC0.57□□□□□ -2.32
HPS3Q969F9 RNU7-104P-201ENST00000459398 79 ntBASIC0.57□□□□□ -2.32
HPS3Q969F9 RNU6-589P-201ENST00000516485 107 ntBASIC0.57□□□□□ -2.32
HPS3Q969F9 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
HPS3Q969F9 MIR8087-201ENST00000612745 78 ntBASIC0.57□□□□□ -2.32
HPS3Q969F9 MIR330-201ENST00000362196 94 ntBASIC0.56□□□□□ -2.32
HPS3Q969F9 Y_RNA.601-201ENST00000410500 113 ntBASIC0.56□□□□□ -2.32
HPS3Q969F9 RNA5SP330-201ENST00000517096 96 ntBASIC0.56□□□□□ -2.32
HPS3Q969F9 RNU7-161P-201ENST00000517289 62 ntBASIC0.56□□□□□ -2.32
HPS3Q969F9 Y_RNA.30-201ENST00000362572 97 ntBASIC0.55□□□□□ -2.32
HPS3Q969F9 Y_RNA.78-201ENST00000362970 110 ntBASIC0.55□□□□□ -2.32
HPS3Q969F9 RNA5SP403-201ENST00000363598 108 ntBASIC0.55□□□□□ -2.32
HPS3Q969F9 RNU6-1163P-201ENST00000364516 107 ntBASIC0.55□□□□□ -2.32
HPS3Q969F9 RNU6-524P-201ENST00000384270 107 ntBASIC0.55□□□□□ -2.32
HPS3Q969F9 RNU6-716P-201ENST00000365621 103 ntBASIC0.54□□□□□ -2.32
HPS3Q969F9 RNU6-1113P-201ENST00000384348 107 ntBASIC0.54□□□□□ -2.32
HPS3Q969F9 AC109327.2-201ENST00000448339 378 ntBASIC0.54□□□□□ -2.32
HPS3Q969F9 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
HPS3Q969F9 Y_RNA.709-201ENST00000516952 92 ntBASIC0.54□□□□□ -2.32
HPS3Q969F9 Y_RNA.291-201ENST00000364886 113 ntBASIC0.53□□□□□ -2.32
HPS3Q969F9 RNU6-863P-201ENST00000515989 104 ntBASIC0.53□□□□□ -2.32
HPS3Q969F9 RNU6-86P-201ENST00000606534 107 ntBASIC0.53□□□□□ -2.32
HPS3Q969F9 MIR7107-201ENST00000611489 80 ntBASIC0.53□□□□□ -2.32
HPS3Q969F9 AL109933.3-201ENST00000619095 188 ntBASIC0.53□□□□□ -2.32
HPS3Q969F9 SNORD36A-201ENST00000362874 73 ntBASIC0.52□□□□□ -2.33
HPS3Q969F9 RNU6-1290P-201ENST00000362957 109 ntBASIC0.52□□□□□ -2.33
HPS3Q969F9 RNU6-1325P-201ENST00000364905 105 ntBASIC0.52□□□□□ -2.33
HPS3Q969F9 RNU2-59P-201ENST00000410482 191 ntBASIC0.52□□□□□ -2.33
HPS3Q969F9 MIR3613-201ENST00000579844 87 ntBASIC0.52□□□□□ -2.33
HPS3Q969F9 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
HPS3Q969F9 Y_RNA.95-201ENST00000363079 95 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 RNU6-726P-201ENST00000364680 107 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 RNU7-13P-201ENST00000516413 62 ntBASIC0.51□□□□□ -2.33
HPS3Q969F9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
HPS3Q969F9 RNU6-1244P-201ENST00000363614 108 ntBASIC0.5□□□□□ -2.33
HPS3Q969F9 MIR181B2-201ENST00000385004 89 ntBASIC0.5□□□□□ -2.33
HPS3Q969F9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
HPS3Q969F9 SCARNA23-201ENST00000516060 130 ntBASIC0.5□□□□□ -2.33
HPS3Q969F9 RNU6-904P-201ENST00000516206 101 ntBASIC0.5□□□□□ -2.33
HPS3Q969F9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
HPS3Q969F9 RNU6-1126P-201ENST00000384002 107 ntBASIC0.49□□□□□ -2.33
HPS3Q969F9 RNU6-106P-201ENST00000384405 107 ntBASIC0.49□□□□□ -2.33
HPS3Q969F9 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
HPS3Q969F9 Y_RNA.96-201ENST00000363092 109 ntBASIC0.48□□□□□ -2.33
HPS3Q969F9 SNORA51.5-201ENST00000384126 131 ntBASIC0.48□□□□□ -2.33
HPS3Q969F9 RNU7-74P-201ENST00000459104 62 ntBASIC0.48□□□□□ -2.33
HPS3Q969F9 AC090625.1-201ENST00000357130 210 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 SNORD44.1-201ENST00000363202 61 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 SNORD115-44-201ENST00000365391 82 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 RNU6-813P-201ENST00000384691 107 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 SNORD41.1-201ENST00000391000 69 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 RNU6-466P-201ENST00000391224 103 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 RNU6-554P-201ENST00000410466 106 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 AC069271.1-201ENST00000445577 156 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 SNORA62.5-201ENST00000516634 120 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 uc_338.28-201ENST00000612082 187 ntBASIC0.47□□□□□ -2.33
HPS3Q969F9 RNA5SP257-201ENST00000363023 116 ntBASIC0.46□□□□□ -2.34
HPS3Q969F9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.46□□□□□ -2.34
HPS3Q969F9 RNU6-756P-201ENST00000383997 107 ntBASIC0.45□□□□□ -2.34
HPS3Q969F9 SNORA19.1-201ENST00000410656 129 ntBASIC0.45□□□□□ -2.34
HPS3Q969F9 RNU6-795P-201ENST00000516323 103 ntBASIC0.45□□□□□ -2.34
HPS3Q969F9 RNU6-1265P-201ENST00000516342 103 ntBASIC0.45□□□□□ -2.34
HPS3Q969F9 TRDV1-202ENST00000621643 102 ntBASIC0.45□□□□□ -2.34
HPS3Q969F9 RNY4P18-201ENST00000391107 89 ntBASIC0.44□□□□□ -2.34
HPS3Q969F9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.44□□□□□ -2.34
HPS3Q969F9 AL162376.1-201ENST00000624117 175 ntBASIC0.44□□□□□ -2.34
HPS3Q969F9 Y_RNA.467-201ENST00000384297 102 ntBASIC0.43□□□□□ -2.34
HPS3Q969F9 MIR590-201ENST00000385008 97 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms