Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-881P-201ENST00000516813 102 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 MIR3658-201ENST00000636291 56 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 RNU6-235P-201ENST00000362644 107 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 RNU6-337P-201ENST00000391243 106 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 RNU6-592P-201ENST00000411333 103 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 MIR4696-201ENST00000581431 70 ntBASIC-0.61□□□□□ -2.51
LMX1AQ8TE12 RNU6-973P-201ENST00000364690 107 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 RNU6-818P-201ENST00000364837 108 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 RNU6-431P-201ENST00000383874 107 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 RNU6-639P-201ENST00000384074 107 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 MIR517B-201ENST00000385102 67 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 RNU6-588P-201ENST00000410281 105 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 MTATP8P1-201ENST00000467115 207 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 RNU6-75P-201ENST00000515944 104 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 SNORA40.17-201ENST00000517256 115 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 AP001328.1-201ENST00000528550 176 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 AC090617.8-201ENST00000623339 167 ntBASIC-0.62□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 SNORD27-201ENST00000363981 72 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 RNU4-36P-201ENST00000364294 144 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 RNU6-901P-201ENST00000384593 106 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 RNA5SP67-201ENST00000516422 131 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 RNU6-635P-201ENST00000516651 102 ntBASIC-0.63□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 SNORD115-19-201ENST00000363098 82 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 SNORD115-18-201ENST00000363293 82 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 SNORD115-23-201ENST00000364461 82 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 SNORD115-17-201ENST00000364612 82 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 MIR204-201ENST00000385200 110 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 SNORA75.5-201ENST00000391291 81 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 AP000533.3-201ENST00000447704 118 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 MIR3646-201ENST00000578301 84 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 AC096720.1-201ENST00000604441 183 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 AL627230.5-201ENST00000619807 58 ntBASIC-0.64□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 MIR548F4-201ENST00000408515 105 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 RNU2-38P-201ENST00000410856 79 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 MTND2P23-201ENST00000422990 651 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 RNU7-6P-201ENST00000516845 62 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 MIR4464-201ENST00000580818 92 ntBASIC-0.65□□□□□ -2.51
LMX1AQ8TE12 RNU6-664P-201ENST00000362381 107 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 RNU6-990P-201ENST00000364385 104 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 SNORD101-201ENST00000384027 73 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 SNORD64-201ENST00000386683 67 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 MIR759-201ENST00000390224 91 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 RNU6-918P-201ENST00000391219 106 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 MIR548H3-201ENST00000408771 118 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 AC022137.1-201ENST00000483735 151 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 MIR6773-201ENST00000612812 74 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 MIR6854-201ENST00000614935 69 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 AC141273.2-201ENST00000618989 130 ntBASIC-0.66□□□□□ -2.52
LMX1AQ8TE12 RNU6-238P-201ENST00000363313 106 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 RNU6-647P-201ENST00000364243 107 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 RNU6-312P-201ENST00000364629 107 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 MIR451A-201ENST00000385059 72 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 MIR518B-201ENST00000385127 83 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 SNORA7.5-201ENST00000410672 110 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 AC022559.1-201ENST00000520905 205 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 AL137067.1-201ENST00000615933 120 ntBASIC-0.67□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 MIRLET7B-201ENST00000385140 83 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 RNU6-243P-201ENST00000391140 107 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 SNORD90-201ENST00000391145 111 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 AC021146.6-201ENST00000514659 117 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 MIR4499-201ENST00000584834 69 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 MIR6844-201ENST00000637122 62 ntBASIC-0.68□□□□□ -2.52
LMX1AQ8TE12 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms