Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 Y_RNA.264-201ENST00000364665 102 ntBASIC1.72□□□□□ -2.13
DEPDC4Q8N2C3 SNORD26-201ENST00000384147 75 ntBASIC1.72□□□□□ -2.13
DEPDC4Q8N2C3 RNU6-380P-201ENST00000410207 107 ntBASIC1.72□□□□□ -2.13
DEPDC4Q8N2C3 AL450471.1-201ENST00000447509 127 ntBASIC1.72□□□□□ -2.13
DEPDC4Q8N2C3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.72□□□□□ -2.13
DEPDC4Q8N2C3 MIR4696-201ENST00000581431 70 ntBASIC1.72□□□□□ -2.13
DEPDC4Q8N2C3 AC108667.1-201ENST00000428618 249 ntBASIC1.71□□□□□ -2.14
DEPDC4Q8N2C3 U7.7-201ENST00000459276 60 ntBASIC1.71□□□□□ -2.14
DEPDC4Q8N2C3 snoU13.31-201ENST00000607291 104 ntBASIC1.71□□□□□ -2.14
DEPDC4Q8N2C3 U6.100-201ENST00000636230 99 ntBASIC1.71□□□□□ -2.14
DEPDC4Q8N2C3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
DEPDC4Q8N2C3 MIRLET7A1-201ENST00000362295 80 ntBASIC1.7□□□□□ -2.14
DEPDC4Q8N2C3 MIR200A-201ENST00000384875 90 ntBASIC1.7□□□□□ -2.14
DEPDC4Q8N2C3 AL157834.3-201ENST00000615543 103 ntBASIC1.7□□□□□ -2.14
DEPDC4Q8N2C3 MIR337-201ENST00000362281 93 ntBASIC1.69□□□□□ -2.14
DEPDC4Q8N2C3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.69□□□□□ -2.14
DEPDC4Q8N2C3 SNORD115-44-201ENST00000365391 82 ntBASIC1.69□□□□□ -2.14
DEPDC4Q8N2C3 SNORD77.2-201ENST00000391045 68 ntBASIC1.69□□□□□ -2.14
DEPDC4Q8N2C3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.69□□□□□ -2.14
DEPDC4Q8N2C3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 RNU6-776P-201ENST00000364403 104 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 RNU6-1022P-201ENST00000365049 104 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 RNY4P3-201ENST00000365254 95 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 SNORA31.14-201ENST00000516728 116 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 RNU6-135P-201ENST00000516769 101 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
DEPDC4Q8N2C3 SNORA40.18-201ENST00000391200 128 ntBASIC1.67□□□□□ -2.14
DEPDC4Q8N2C3 RNU6-935P-201ENST00000410371 100 ntBASIC1.67□□□□□ -2.14
DEPDC4Q8N2C3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.66□□□□□ -2.14
DEPDC4Q8N2C3 MIR520H-201ENST00000385126 88 ntBASIC1.66□□□□□ -2.14
DEPDC4Q8N2C3 AC002350.1-201ENST00000490759 375 ntBASIC1.66□□□□□ -2.14
DEPDC4Q8N2C3 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 RNU5F-1-201ENST00000362507 117 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 MIR499A-201ENST00000384903 122 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 AC145423.2-201ENST00000610631 239 ntBASIC1.65□□□□□ -2.15
DEPDC4Q8N2C3 RNU6-208P-201ENST00000362431 107 ntBASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 RNU6-161P-201ENST00000363051 106 ntBASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 RNA5SP403-201ENST00000363598 108 ntBASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 SNORD105-201ENST00000386910 85 ntBASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.64□□□□□ -2.15
DEPDC4Q8N2C3 SNORD89-201ENST00000390981 114 ntBASIC1.63□□□□□ -2.15
DEPDC4Q8N2C3 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
DEPDC4Q8N2C3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.63□□□□□ -2.15
DEPDC4Q8N2C3 RNU1-124P-201ENST00000363861 145 ntBASIC1.62□□□□□ -2.15
DEPDC4Q8N2C3 Y_RNA.207-201ENST00000364142 106 ntBASIC1.62□□□□□ -2.15
DEPDC4Q8N2C3 RNA5SP117-201ENST00000365294 118 ntBASIC1.62□□□□□ -2.15
DEPDC4Q8N2C3 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
DEPDC4Q8N2C3 MIR8070-201ENST00000616510 88 ntBASIC1.62□□□□□ -2.15
DEPDC4Q8N2C3 SNORD115-24-201ENST00000363528 82 ntBASIC1.61□□□□□ -2.15
DEPDC4Q8N2C3 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
DEPDC4Q8N2C3 AC025627.3-201ENST00000582078 182 ntBASIC1.61□□□□□ -2.15
DEPDC4Q8N2C3 U7.4-201ENST00000614961 63 ntBASIC1.61□□□□□ -2.15
DEPDC4Q8N2C3 MIR1297-201ENST00000637311 77 ntBASIC1.61□□□□□ -2.15
DEPDC4Q8N2C3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
DEPDC4Q8N2C3 U3.27-201ENST00000391237 200 ntBASIC1.6□□□□□ -2.15
DEPDC4Q8N2C3 RNU7-13P-201ENST00000516413 62 ntBASIC1.6□□□□□ -2.15
DEPDC4Q8N2C3 SNORD90-201ENST00000391145 111 ntBASIC1.59□□□□□ -2.15
DEPDC4Q8N2C3 MIR942-201ENST00000401111 86 ntBASIC1.59□□□□□ -2.15
DEPDC4Q8N2C3 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
DEPDC4Q8N2C3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.59□□□□□ -2.15
DEPDC4Q8N2C3 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
DEPDC4Q8N2C3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.59□□□□□ -2.15
DEPDC4Q8N2C3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
DEPDC4Q8N2C3 SNORD114-24-201ENST00000365029 72 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 AC073261.1-201ENST00000429409 121 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-287P-201ENST00000516230 98 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-807P-201ENST00000516805 107 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 MIR4639-201ENST00000584938 69 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.58□□□□□ -2.16
DEPDC4Q8N2C3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 MIR451A-201ENST00000385059 72 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 MIR889-201ENST00000401280 79 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-303P-201ENST00000517091 106 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 RNU7-161P-201ENST00000517289 62 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 YWHAEP2-201ENST00000580066 112 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 YWHAEP3-201ENST00000582767 121 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-1229P-201ENST00000364295 107 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 SNORA25.8-201ENST00000364831 128 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 MIR489-201ENST00000384923 84 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 MIR216B-201ENST00000390186 82 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 SNORD124-201ENST00000459577 104 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-469P-201ENST00000516253 101 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 RNA5SP404-201ENST00000517118 132 ntBASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.56□□□□□ -2.16
DEPDC4Q8N2C3 MIR573-201ENST00000384964 99 ntBASIC1.55□□□□□ -2.16
DEPDC4Q8N2C3 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
DEPDC4Q8N2C3 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
DEPDC4Q8N2C3 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
DEPDC4Q8N2C3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.54□□□□□ -2.16
DEPDC4Q8N2C3 RNU2-59P-201ENST00000410482 191 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 937.3 ms