Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.24□□□□□ -2.21
VRK3Q8IV63 AC015818.7-201ENST00000428754 109 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 RNU7-90P-201ENST00000459216 62 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 FGF7P7-201ENST00000514120 227 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 Y_RNA.809-201ENST00000516058 95 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 RNU7-40P-201ENST00000516397 64 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 RNU7-156P-201ENST00000517214 74 ntBASIC1.24□□□□□ -2.21
VRK3Q8IV63 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VRK3Q8IV63 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
VRK3Q8IV63 AL606490.4-201ENST00000423117 127 ntBASIC1.23□□□□□ -2.21
VRK3Q8IV63 AC097635.1-201ENST00000450678 155 ntBASIC1.23□□□□□ -2.21
VRK3Q8IV63 RPS29P23-201ENST00000458635 123 ntBASIC1.23□□□□□ -2.21
VRK3Q8IV63 Y_RNA.697-201ENST00000516776 113 ntBASIC1.23□□□□□ -2.21
VRK3Q8IV63 MIR8070-201ENST00000616510 88 ntBASIC1.23□□□□□ -2.21
VRK3Q8IV63 MIRLET7F1-201ENST00000362202 87 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 SNORA25.9-201ENST00000365087 128 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.22□□□□□ -2.21
VRK3Q8IV63 AC138907.6-201ENST00000568401 126 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 AC138869.1-201ENST00000568623 124 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 AC023827.1-201ENST00000569247 97 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 TRDV1-202ENST00000621643 102 ntBASIC1.22□□□□□ -2.21
VRK3Q8IV63 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VRK3Q8IV63 RNU6-291P-201ENST00000384720 107 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 MIR938-201ENST00000401216 83 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 RNU7-56P-201ENST00000458744 62 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 MIR4804-201ENST00000581683 73 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 U7.4-201ENST00000614961 63 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
VRK3Q8IV63 RNA5SP245-201ENST00000364239 121 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 Y_RNA.264-201ENST00000364665 102 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 MIR499A-201ENST00000384903 122 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 SNORD90-201ENST00000391145 111 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 AC244505.6-201ENST00000452829 130 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 RNU6-1265P-201ENST00000516342 103 ntBASIC1.2□□□□□ -2.22
VRK3Q8IV63 RNU6-161P-201ENST00000363051 106 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 MIR599-201ENST00000385069 95 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 SNORD77.2-201ENST00000391045 68 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VRK3Q8IV63 RNU7-102P-201ENST00000458948 62 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 MIR4696-201ENST00000581431 70 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 AC008608.1-201ENST00000603910 127 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 MIR7111-201ENST00000619751 72 ntBASIC1.19□□□□□ -2.22
VRK3Q8IV63 RNU6-664P-201ENST00000362381 107 ntBASIC1.18□□□□□ -2.22
VRK3Q8IV63 RNU6-364P-201ENST00000384387 107 ntBASIC1.18□□□□□ -2.22
VRK3Q8IV63 RNU6-535P-201ENST00000384722 107 ntBASIC1.18□□□□□ -2.22
VRK3Q8IV63 RNU6-523P-201ENST00000516304 54 ntBASIC1.18□□□□□ -2.22
VRK3Q8IV63 RNU6-1108P-201ENST00000516308 104 ntBASIC1.18□□□□□ -2.22
VRK3Q8IV63 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
VRK3Q8IV63 Y_RNA.118-201ENST00000363300 101 ntBASIC1.17□□□□□ -2.22
VRK3Q8IV63 Y_RNA.532-201ENST00000384590 113 ntBASIC1.17□□□□□ -2.22
VRK3Q8IV63 MIR889-201ENST00000401280 79 ntBASIC1.17□□□□□ -2.22
VRK3Q8IV63 AC073261.1-201ENST00000429409 121 ntBASIC1.17□□□□□ -2.22
VRK3Q8IV63 U6.100-201ENST00000636230 99 ntBASIC1.17□□□□□ -2.22
VRK3Q8IV63 Y_RNA.239-201ENST00000364444 113 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 SNORD101-201ENST00000384027 73 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 RNU6-380P-201ENST00000410207 107 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 Y_RNA.596-201ENST00000410462 109 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 snoU13.17-201ENST00000458802 104 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 SCARNA18B-201ENST00000458806 135 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 AC139453.2-201ENST00000487255 133 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 Y_RNA.788-201ENST00000622394 112 ntBASIC1.16□□□□□ -2.22
VRK3Q8IV63 RNU6-208P-201ENST00000362431 107 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 RNU6-1051P-201ENST00000365471 102 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 MIR1827-201ENST00000408549 66 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 AC074348.1-201ENST00000426503 132 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 AC002429.1-201ENST00000437672 148 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 RNU6-977P-201ENST00000516411 103 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 uc_338.16-201ENST00000621804 95 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 MIR1297-201ENST00000637311 77 ntBASIC1.15□□□□□ -2.23
VRK3Q8IV63 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
VRK3Q8IV63 MIR1-1-201ENST00000362147 71 ntBASIC1.14□□□□□ -2.23
VRK3Q8IV63 Y_RNA.355-201ENST00000365462 98 ntBASIC1.14□□□□□ -2.23
VRK3Q8IV63 Y_RNA.545-201ENST00000384652 105 ntBASIC1.14□□□□□ -2.23
VRK3Q8IV63 RNU1-119P-201ENST00000391122 165 ntBASIC1.14□□□□□ -2.23
VRK3Q8IV63 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.14□□□□□ -2.23
VRK3Q8IV63 RNU6-994P-201ENST00000410507 111 ntBASIC1.14□□□□□ -2.23
VRK3Q8IV63 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.14□□□□□ -2.23
VRK3Q8IV63 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
VRK3Q8IV63 Y_RNA.224-201ENST00000364308 111 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 SNORA24B-201ENST00000384176 131 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 Y_RNA.565-201ENST00000384719 101 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 MIR100-201ENST00000385259 80 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 RNU6-303P-201ENST00000517091 106 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 YWHAEP2-201ENST00000580066 112 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 YWHAEP3-201ENST00000582767 121 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.13□□□□□ -2.23
VRK3Q8IV63 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
VRK3Q8IV63 Y_RNA.32-201ENST00000362589 110 ntBASIC1.12□□□□□ -2.23
VRK3Q8IV63 Y_RNA.207-201ENST00000364142 106 ntBASIC1.12□□□□□ -2.23
VRK3Q8IV63 RNU6-392P-201ENST00000364926 101 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 218.3 ms