Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.283-201ENST00000364798 112 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 MIR520F-201ENST00000384824 87 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 RNU6-243P-201ENST00000391140 107 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 RNU6-519P-201ENST00000410590 108 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 AL606490.4-201ENST00000423117 127 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 MIR4452-201ENST00000583004 71 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF549Q6P9A3 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 RNU6-535P-201ENST00000384722 107 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 RNU1-119P-201ENST00000391122 165 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 AC097635.1-201ENST00000450678 155 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 AC244505.6-201ENST00000452829 130 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 RNU7-171P-201ENST00000459581 62 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 RNU7-10P-201ENST00000607194 63 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 MIR1245B-201ENST00000636115 69 ntBASIC0.91□□□□□ -2.26
ZNF549Q6P9A3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
ZNF549Q6P9A3 MIR96-201ENST00000362288 78 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 RNU6-132P-201ENST00000383863 107 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 RNU6-524P-201ENST00000384270 107 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 RNU6-1265P-201ENST00000516342 103 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 SNORA31.14-201ENST00000516728 116 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 AC138907.6-201ENST00000568401 126 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 AC138869.1-201ENST00000568623 124 ntBASIC0.9□□□□□ -2.27
ZNF549Q6P9A3 RNU6-1276P-201ENST00000365372 104 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 SNORD114-22-201ENST00000365423 72 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 MIR520H-201ENST00000385126 88 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 SNORD89-201ENST00000390981 114 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.611-201ENST00000410682 108 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 AC067940.1-201ENST00000458411 300 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 U7.7-201ENST00000459276 60 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 RNU7-153P-201ENST00000516455 62 ntBASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF549Q6P9A3 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 MIR519C-201ENST00000385053 87 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 MIR599-201ENST00000385069 95 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 RNA5SP292-201ENST00000390974 118 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 RNA5SP395-201ENST00000516567 118 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 MIR4666B-201ENST00000578142 81 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 TRDV1-202ENST00000621643 102 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.88□□□□□ -2.27
ZNF549Q6P9A3 RNU6-228P-201ENST00000362700 106 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.219-201ENST00000364232 113 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 RNU1-93P-201ENST00000364704 169 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 RNU6-1275P-201ENST00000391087 107 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 AC002350.1-201ENST00000490759 375 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 MIR3064-201ENST00000581130 66 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 U6.100-201ENST00000636230 99 ntBASIC0.87□□□□□ -2.27
ZNF549Q6P9A3 RNU4-32P-201ENST00000363404 141 ntBASIC0.86□□□□□ -2.27
ZNF549Q6P9A3 RNU6-466P-201ENST00000391224 103 ntBASIC0.86□□□□□ -2.27
ZNF549Q6P9A3 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
ZNF549Q6P9A3 AC140658.3-201ENST00000567603 271 ntBASIC0.86□□□□□ -2.27
ZNF549Q6P9A3 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
ZNF549Q6P9A3 MIR4536-1-201ENST00000583537 88 ntBASIC0.86□□□□□ -2.27
ZNF549Q6P9A3 MIRLET7F1-201ENST00000362202 87 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.426-201ENST00000384068 113 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 SNORD78.1-201ENST00000390866 65 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 MIR942-201ENST00000401111 86 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 MIR1236-201ENST00000408340 102 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.607-201ENST00000410597 98 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
ZNF549Q6P9A3 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 RNA5SP403-201ENST00000363598 108 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 RNU6-811P-201ENST00000384069 107 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 RNU6-242P-201ENST00000384359 107 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 AC093729.1-201ENST00000513074 128 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 RNU6-65P-201ENST00000516332 98 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 AC104996.3-201ENST00000590718 94 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 AL136317.1-201ENST00000612653 226 ntBASIC0.84□□□□□ -2.27
ZNF549Q6P9A3 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.221-201ENST00000364248 96 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 Y_RNA.313-201ENST00000365095 103 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 RNU6-1124P-201ENST00000384169 107 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 MIR573-201ENST00000384964 99 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 SNORD90-201ENST00000391145 111 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 SNORA25.13-201ENST00000516395 103 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 SNORA18.5-201ENST00000516616 101 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 RNU7-161P-201ENST00000517289 62 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 MIR4696-201ENST00000581431 70 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
ZNF549Q6P9A3 RNU6-624P-201ENST00000363411 107 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms