Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 SNORD56B-201ENST00000384713 71 ntBASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 MIR513C-201ENST00000401352 84 ntBASIC-0.38□□□□□ -2.47
RPUSD3Q6P087 SNORD115-19-201ENST00000363098 82 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 RNU6-508P-201ENST00000363231 103 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 SNORD115-18-201ENST00000363293 82 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 SNORD115-17-201ENST00000364612 82 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 RNU6-200P-201ENST00000364743 107 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 RNU4-11P-201ENST00000365287 132 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 MIR9-2-201ENST00000384838 87 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 SNORA25.13-201ENST00000516395 103 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 AC108081.1-201ENST00000604358 221 ntBASIC-0.39□□□□□ -2.47
RPUSD3Q6P087 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 RNU6-574P-201ENST00000384265 107 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 SNORA49-201ENST00000386157 136 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 RNU6-861P-201ENST00000516745 106 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 RNU6-850P-201ENST00000516934 103 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 MTND5P40-201ENST00000559945 246 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 MIR3121-201ENST00000579680 77 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 MIR3681-201ENST00000580089 72 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 MIR548AG2-201ENST00000581228 64 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 MIR548AE1-201ENST00000583292 70 ntBASIC-0.4□□□□□ -2.47
RPUSD3Q6P087 MIR101-1-201ENST00000362265 75 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 SNORD114-14-201ENST00000362723 75 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 RNU6-647P-201ENST00000364243 107 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 MIR539-201ENST00000365690 78 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 MIR604-201ENST00000384880 94 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 RNA5SP136-201ENST00000410906 107 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 MIR4280-201ENST00000582178 76 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 AC021753.1-201ENST00000635724 168 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 AL162726.3-218ENST00000636401 95 ntBASIC-0.41□□□□□ -2.48
RPUSD3Q6P087 RNU6-915P-201ENST00000364943 103 ntBASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 AC093423.1-201ENST00000440817 142 ntBASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 AC087741.2-201ENST00000619415 172 ntBASIC-0.42□□□□□ -2.48
RPUSD3Q6P087 RNU6-151P-201ENST00000364158 107 ntBASIC-0.43□□□□□ -2.48
RPUSD3Q6P087 MIR34C-201ENST00000384831 77 ntBASIC-0.43□□□□□ -2.48
RPUSD3Q6P087 MIR516B1-201ENST00000385211 90 ntBASIC-0.43□□□□□ -2.48
RPUSD3Q6P087 RNU6-521P-201ENST00000516663 105 ntBASIC-0.43□□□□□ -2.48
RPUSD3Q6P087 RNU6-86P-201ENST00000606534 107 ntBASIC-0.43□□□□□ -2.48
RPUSD3Q6P087 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.43□□□□□ -2.48
RPUSD3Q6P087 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 RNY1P11-201ENST00000363759 113 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 RNU1-141P-201ENST00000364623 158 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 MT-TG-201ENST00000387429 68 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 SNORA3B-201ENST00000391305 131 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 RNA5SP451-201ENST00000410588 110 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 AL500527.2-201ENST00000454105 95 ntBASIC-0.44□□□□□ -2.48
RPUSD3Q6P087 SNORD114-15-201ENST00000364687 72 ntBASIC-0.45□□□□□ -2.48
RPUSD3Q6P087 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.45□□□□□ -2.48
RPUSD3Q6P087 MIR617-201ENST00000385030 97 ntBASIC-0.45□□□□□ -2.48
RPUSD3Q6P087 RNU6-721P-201ENST00000410155 105 ntBASIC-0.45□□□□□ -2.48
RPUSD3Q6P087 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 snoU13.19-201ENST00000459148 104 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 RNU7-106P-201ENST00000459514 67 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 RNA5SP66-201ENST00000517178 101 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 AP001328.1-201ENST00000528550 176 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 AC108676.2-201ENST00000605225 163 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 AC069503.3-201ENST00000618674 145 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 uc_338.10-201ENST00000621872 182 ntBASIC-0.46□□□□□ -2.48
RPUSD3Q6P087 RNU6-379P-201ENST00000363813 104 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 RNU6-682P-201ENST00000363843 106 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 RNU6-455P-201ENST00000384681 107 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 RNU6-243P-201ENST00000391140 107 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 RNU7-197P-201ENST00000458836 62 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 RNU6-138P-201ENST00000515952 107 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 RN7SKP19-201ENST00000516016 252 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 SNORD38.3-201ENST00000516599 73 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 MIR4473-201ENST00000583731 91 ntBASIC-0.47□□□□□ -2.48
RPUSD3Q6P087 MIR516A2-201ENST00000384888 90 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 MIR516A1-201ENST00000385033 90 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 AC097510.1-201ENST00000510945 133 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 SNORA81.3-201ENST00000517283 198 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 MIR4263-201ENST00000584745 83 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 MIR6851-201ENST00000617060 67 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 AP001340.1-201ENST00000624405 217 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 AL512310.12-203ENST00000640543 90 ntBASIC-0.48□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 MIR181B2-201ENST00000385004 89 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 MIR519E-201ENST00000385075 84 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 RNU6-460P-201ENST00000391158 108 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 RNU4-63P-201ENST00000411313 118 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 SCARNA17-201ENST00000516183 144 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 MIR8068-201ENST00000618032 68 ntBASIC-0.49□□□□□ -2.49
RPUSD3Q6P087 SNORD95.1-201ENST00000364099 68 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 RNY4P3-201ENST00000365254 95 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 MIR196A1-201ENST00000388006 70 ntBASIC-0.5□□□□□ -2.49
RPUSD3Q6P087 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms