Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
E4F1Q66K89 MIR548BB-201ENST00000626714 66 ntBASIC1.17□□□□□ -2.22
E4F1Q66K89 RNU6-1152P-201ENST00000384576 107 ntBASIC1.16□□□□□ -2.22
E4F1Q66K89 MIR644A-201ENST00000385262 94 ntBASIC1.16□□□□□ -2.22
E4F1Q66K89 SNORD99-201ENST00000408612 74 ntBASIC1.16□□□□□ -2.22
E4F1Q66K89 AC244505.6-201ENST00000452829 130 ntBASIC1.16□□□□□ -2.22
E4F1Q66K89 RNU6-469P-201ENST00000516253 101 ntBASIC1.16□□□□□ -2.22
E4F1Q66K89 SNORD115-24-201ENST00000363528 82 ntBASIC1.15□□□□□ -2.23
E4F1Q66K89 RNU6-573P-201ENST00000383938 106 ntBASIC1.15□□□□□ -2.23
E4F1Q66K89 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
E4F1Q66K89 RNU6-75P-201ENST00000515944 104 ntBASIC1.15□□□□□ -2.23
E4F1Q66K89 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
E4F1Q66K89 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
E4F1Q66K89 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
E4F1Q66K89 MIRLET7F1-201ENST00000362202 87 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 RNU6-811P-201ENST00000384069 107 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 MIR1236-201ENST00000408340 102 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 AC011195.1-201ENST00000578177 177 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 MIR3612-201ENST00000579753 87 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 MIR5588-201ENST00000581890 63 ntBASIC1.14□□□□□ -2.23
E4F1Q66K89 SNORD115-37-201ENST00000363768 82 ntBASIC1.13□□□□□ -2.23
E4F1Q66K89 Y_RNA.508-201ENST00000384502 114 ntBASIC1.13□□□□□ -2.23
E4F1Q66K89 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.13□□□□□ -2.23
E4F1Q66K89 U6.100-201ENST00000636230 99 ntBASIC1.13□□□□□ -2.23
E4F1Q66K89 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
E4F1Q66K89 RNU6-132P-201ENST00000383863 107 ntBASIC1.12□□□□□ -2.23
E4F1Q66K89 MIR548U-201ENST00000390728 81 ntBASIC1.12□□□□□ -2.23
E4F1Q66K89 RNU7-153P-201ENST00000516455 62 ntBASIC1.12□□□□□ -2.23
E4F1Q66K89 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.12□□□□□ -2.23
E4F1Q66K89 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
E4F1Q66K89 RNU6-1276P-201ENST00000365372 104 ntBASIC1.11□□□□□ -2.23
E4F1Q66K89 Y_RNA.426-201ENST00000384068 113 ntBASIC1.11□□□□□ -2.23
E4F1Q66K89 RNA5SP292-201ENST00000390974 118 ntBASIC1.11□□□□□ -2.23
E4F1Q66K89 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
E4F1Q66K89 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
E4F1Q66K89 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
E4F1Q66K89 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
E4F1Q66K89 RNU6-979P-201ENST00000383896 107 ntBASIC1.1□□□□□ -2.23
E4F1Q66K89 AL603825.1-201ENST00000438481 80 ntBASIC1.1□□□□□ -2.23
E4F1Q66K89 RNU7-104P-201ENST00000459398 79 ntBASIC1.1□□□□□ -2.23
E4F1Q66K89 MIR3064-201ENST00000581130 66 ntBASIC1.1□□□□□ -2.23
E4F1Q66K89 AC104996.3-201ENST00000590718 94 ntBASIC1.1□□□□□ -2.23
E4F1Q66K89 AC006160.2-201ENST00000637708 154 ntBASIC1.1□□□□□ -2.23
E4F1Q66K89 Y_RNA.338-201ENST00000365320 114 ntBASIC1.09□□□□□ -2.23
E4F1Q66K89 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
E4F1Q66K89 SNORD101-201ENST00000384027 73 ntBASIC1.09□□□□□ -2.23
E4F1Q66K89 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
E4F1Q66K89 Y_RNA.596-201ENST00000410462 109 ntBASIC1.09□□□□□ -2.23
E4F1Q66K89 AC093729.1-201ENST00000513074 128 ntBASIC1.09□□□□□ -2.23
E4F1Q66K89 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
E4F1Q66K89 RNU6-1229P-201ENST00000364295 107 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 Y_RNA.239-201ENST00000364444 113 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 Y_RNA.491-201ENST00000384417 107 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 AC244098.3-201ENST00000424803 96 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 RNU6-1265P-201ENST00000516342 103 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 SNORA18.5-201ENST00000516616 101 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 RNU6-135P-201ENST00000516769 101 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 RNU7-161P-201ENST00000517289 62 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 MIR3678-201ENST00000578455 94 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 MIR1245B-201ENST00000636115 69 ntBASIC1.08□□□□□ -2.24
E4F1Q66K89 RNU6-664P-201ENST00000362381 107 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 MIR518E-201ENST00000385252 88 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 RNU7-13P-201ENST00000516413 62 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 MIR4796-201ENST00000580742 81 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 MIR4696-201ENST00000581431 70 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
E4F1Q66K89 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
E4F1Q66K89 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
E4F1Q66K89 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.06□□□□□ -2.24
E4F1Q66K89 MIR4498-201ENST00000577599 66 ntBASIC1.06□□□□□ -2.24
E4F1Q66K89 AC244669.1-204ENST00000621564 178 ntBASIC1.06□□□□□ -2.24
E4F1Q66K89 RNA5SP403-201ENST00000363598 108 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 SNORD18A-201ENST00000363753 72 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 Y_RNA.437-201ENST00000384113 113 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 MIR548L-201ENST00000408303 86 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 RNU7-171P-201ENST00000459581 62 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 MIR4639-201ENST00000584938 69 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.05□□□□□ -2.24
E4F1Q66K89 MIR18A-201ENST00000362310 71 ntBASIC1.04□□□□□ -2.24
E4F1Q66K89 SNORD28-201ENST00000384706 75 ntBASIC1.04□□□□□ -2.24
E4F1Q66K89 Y_RNA.607-201ENST00000410597 98 ntBASIC1.04□□□□□ -2.24
E4F1Q66K89 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
E4F1Q66K89 SNORA25.13-201ENST00000516395 103 ntBASIC1.04□□□□□ -2.24
E4F1Q66K89 Y_RNA.219-201ENST00000364232 113 ntBASIC1.03□□□□□ -2.24
E4F1Q66K89 Y_RNA.327-201ENST00000365201 102 ntBASIC1.03□□□□□ -2.24
E4F1Q66K89 SNORD78.1-201ENST00000390866 65 ntBASIC1.03□□□□□ -2.24
E4F1Q66K89 AC067863.3-201ENST00000624172 122 ntBASIC1.03□□□□□ -2.24
E4F1Q66K89 Y_RNA.207-201ENST00000364142 106 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 RNU6-787P-201ENST00000384032 107 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.02□□□□□ -2.25
E4F1Q66K89 TRMT112P2-201ENST00000512910 132 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 RNU6-287P-201ENST00000516230 98 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms