Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 RNU6-361P-201ENST00000364454 107 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 RNU7-164P-201ENST00000459221 62 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 RNU6-157P-201ENST00000383957 107 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 SNORD4B-201ENST00000459083 72 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 AC083798.1-201ENST00000472671 131 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 MRPS35P2-201ENST00000508242 191 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 AC138907.4-201ENST00000570107 226 ntBASIC-1.82□□□□□ -2.7
VPS13DQ5THJ4 MIR34C-201ENST00000384831 77 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 RNU6-816P-201ENST00000390914 107 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 RNU6-445P-201ENST00000516949 107 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 MIR526A2-201ENST00000390198 65 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 RNU6-468P-201ENST00000384003 109 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 SNORD77.4-201ENST00000516158 81 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 U6.106-201ENST00000636360 105 ntBASIC-1.83□□□□□ -2.7
VPS13DQ5THJ4 RNU7-180P-201ENST00000459240 63 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 MTND3P22-201ENST00000510932 243 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 RNY3P3-201ENST00000363816 102 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 AC016550.1-201ENST00000505348 785 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 MIR5688-201ENST00000580619 83 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 MIR1244-1-201ENST00000612829 85 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 AL359920.1-201ENST00000618332 176 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 MIR1244-3-201ENST00000635744 85 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 MIR1244-2-201ENST00000636449 85 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 MIR1244-4-202ENST00000636813 85 ntBASIC-1.84□□□□□ -2.7
VPS13DQ5THJ4 RNU6-763P-201ENST00000390865 106 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 AL593851.1-201ENST00000426171 157 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 Vault.3-201ENST00000516676 95 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 MTCO2P4-201ENST00000517968 247 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 AC073869.6-201ENST00000640656 341 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 MIR581-201ENST00000384895 96 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 MIR3064-201ENST00000581130 66 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 AL138825.1-201ENST00000618587 192 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 MIR369-201ENST00000362155 70 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 RNU6-340P-201ENST00000364005 107 ntBASIC-1.85□□□□□ -2.71
VPS13DQ5THJ4 RNU6-308P-201ENST00000390957 107 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 RNU7-110P-201ENST00000516891 62 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 AL512310.12-203ENST00000640543 90 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 RNU6-737P-201ENST00000365370 107 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 AC019235.1-201ENST00000503847 207 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 RNU7-160P-201ENST00000516660 62 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 AP002963.1-201ENST00000530590 184 ntBASIC-1.86□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 AL356010.1-201ENST00000456364 102 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 MTCO2P24-201ENST00000515611 426 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 MTND5P26-201ENST00000426018 1752 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 MIR3913-1-201ENST00000577744 102 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 RNU6-645P-201ENST00000364649 106 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 RNA5SP292-201ENST00000390974 118 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 MTND4P28-201ENST00000426217 387 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 U6.92-201ENST00000636464 89 ntBASIC-1.87□□□□□ -2.71
VPS13DQ5THJ4 AC119751.7-201ENST00000600494 245 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 AC099654.13-201ENST00000639774 207 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 RN7SKP295-201ENST00000517264 153 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 RNU7-187P-201ENST00000458985 68 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 RNU6-752P-201ENST00000516376 102 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 MTND3P12-201ENST00000559068 328 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 AC002553.4-201ENST00000616896 331 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 AC097520.1-201ENST00000624435 385 ntBASIC-1.88□□□□□ -2.71
VPS13DQ5THJ4 MTND3P1-201ENST00000441336 220 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNY4P18-201ENST00000391107 89 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 AC116353.3-201ENST00000511215 249 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 MTND4P7-201ENST00000523876 130 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-501P-201ENST00000364072 100 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-95P-201ENST00000384697 107 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 SNORA7.5-201ENST00000410672 110 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-976P-201ENST00000516086 111 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 SNORA20.3-201ENST00000516880 132 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 AC104996.3-201ENST00000590718 94 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 AC025166.1-201ENST00000612411 163 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 AC016911.1-201ENST00000613297 452 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-656P-201ENST00000516785 107 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 AC084782.3-201ENST00000612282 578 ntBASIC-1.89□□□□□ -2.71
VPS13DQ5THJ4 RNU6-254P-201ENST00000363377 107 ntBASIC-1.9□□□□□ -2.71
VPS13DQ5THJ4 SNORD38.1-201ENST00000363863 68 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 278.5 ms