Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SNORA40.6-201ENST00000391153 128 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 AC079150.2-201ENST00000443733 78 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 RNU6-274P-201ENST00000459566 107 ntBASIC2.33□□□□□ -2.04
RC3H1Q5TC82 U3.27-201ENST00000391237 200 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 MIR8081-201ENST00000611533 95 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 AL359851.1-201ENST00000569460 4997 ntBASIC2.32□□□□□ -2.04
RC3H1Q5TC82 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RC3H1Q5TC82 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RC3H1Q5TC82 RNA5SP160-201ENST00000364866 120 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 RNU6-382P-201ENST00000365181 106 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RC3H1Q5TC82 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.31□□□□□ -2.04
RC3H1Q5TC82 RNU6-1057P-201ENST00000517162 102 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 MIR8070-201ENST00000616510 88 ntBASIC2.31□□□□□ -2.04
RC3H1Q5TC82 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RC3H1Q5TC82 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.3□□□□□ -2.04
RC3H1Q5TC82 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
RC3H1Q5TC82 Y_RNA.258-201ENST00000364613 105 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 MIR676-201ENST00000390702 67 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 SNORD83.1-201ENST00000411362 77 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 AC244098.3-201ENST00000424803 96 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 TRMT112P2-201ENST00000512910 132 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 MIR4303-201ENST00000581299 66 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 AL109933.3-201ENST00000619095 188 ntBASIC2.3□□□□□ -2.04
RC3H1Q5TC82 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RC3H1Q5TC82 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
RC3H1Q5TC82 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RC3H1Q5TC82 AL096840.1-201ENST00000603287 93 ntBASIC2.29□□□□□ -2.04
RC3H1Q5TC82 RNU6-934P-201ENST00000365154 107 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 MIR125B2-201ENST00000385128 89 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RC3H1Q5TC82 RNU6-287P-201ENST00000516230 98 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.28□□□□□ -2.04
RC3H1Q5TC82 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RC3H1Q5TC82 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RC3H1Q5TC82 RNU6-1187P-201ENST00000364771 110 ntBASIC2.27□□□□□ -2.05
RC3H1Q5TC82 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
RC3H1Q5TC82 MIR499A-201ENST00000384903 122 ntBASIC2.27□□□□□ -2.05
RC3H1Q5TC82 RNA5SP245-201ENST00000364239 121 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 RNU6-977P-201ENST00000516411 103 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 AL645939.4-201ENST00000604495 135 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 MIR502-201ENST00000606349 86 ntBASIC2.26□□□□□ -2.05
RC3H1Q5TC82 SNORD113.3-201ENST00000364630 78 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU6-535P-201ENST00000384722 107 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU6-982P-201ENST00000516216 102 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 AL078603.1-201ENST00000603824 313 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 MIR8074-201ENST00000615081 81 ntBASIC2.25□□□□□ -2.05
RC3H1Q5TC82 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RC3H1Q5TC82 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
RC3H1Q5TC82 AL691482.2-201ENST00000457453 84 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 RNU7-95P-201ENST00000459222 64 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 MIR3664-201ENST00000579074 99 ntBASIC2.24□□□□□ -2.05
RC3H1Q5TC82 SNORD115-44-201ENST00000365391 82 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 RNA5SP489-201ENST00000410986 109 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 MIR4771-2-201ENST00000577758 74 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 MIR4771-1-201ENST00000582617 74 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 AL773524.1-201ENST00000614065 229 ntBASIC2.23□□□□□ -2.05
RC3H1Q5TC82 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RC3H1Q5TC82 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RC3H1Q5TC82 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
RC3H1Q5TC82 AC244505.6-201ENST00000452829 130 ntBASIC2.22□□□□□ -2.05
RC3H1Q5TC82 AC008608.1-201ENST00000603910 127 ntBASIC2.22□□□□□ -2.05
RC3H1Q5TC82 MIR8063-201ENST00000621930 81 ntBASIC2.22□□□□□ -2.05
RC3H1Q5TC82 Y_RNA.355-201ENST00000365462 98 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 MTND4LP1-201ENST00000446263 157 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 AC036111.3-201ENST00000526389 112 ntBASIC2.21□□□□□ -2.06
RC3H1Q5TC82 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.21□□□□□ -2.06
RC3H1Q5TC82 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNU6-668P-201ENST00000364180 107 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 SNORA16.1-201ENST00000364597 132 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 SNORD75.2-201ENST00000408784 58 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNU7-24P-201ENST00000458867 62 ntBASIC2.2□□□□□ -2.06
RC3H1Q5TC82 RNU6-829P-201ENST00000363700 112 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 Y_RNA.330-201ENST00000365230 109 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 MIR3920-201ENST00000581751 86 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 AC103810.8-201ENST00000607347 118 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.19□□□□□ -2.06
RC3H1Q5TC82 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RC3H1Q5TC82 MIR302D-201ENST00000362275 68 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RPS26P5-201ENST00000418544 335 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RNU6-542P-201ENST00000516405 103 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
RC3H1Q5TC82 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RC3H1Q5TC82 RNU6-495P-201ENST00000362995 107 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 Y_RNA.236-201ENST00000364427 111 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 RNU6-1039P-201ENST00000383931 107 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 RNU6-364P-201ENST00000384387 107 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.17□□□□□ -2.06
RC3H1Q5TC82 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms