Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
VARS2Q5ST30 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VARS2Q5ST30 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VARS2Q5ST30 Y_RNA.164-201ENST00000363709 102 ntBASIC2.63□□□□□ -1.99
VARS2Q5ST30 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VARS2Q5ST30 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
VARS2Q5ST30 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VARS2Q5ST30 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
VARS2Q5ST30 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VARS2Q5ST30 RNA5SP456-201ENST00000364002 114 ntBASIC2.62□□□□□ -1.99
VARS2Q5ST30 RNU7-161P-201ENST00000517289 62 ntBASIC2.62□□□□□ -1.99
VARS2Q5ST30 SNORD115-24-201ENST00000363528 82 ntBASIC2.61□□□□□ -1.99
VARS2Q5ST30 SNORD116.2-201ENST00000391251 93 ntBASIC2.61□□□□□ -1.99
VARS2Q5ST30 RNA5SP450-201ENST00000411206 102 ntBASIC2.61□□□□□ -1.99
VARS2Q5ST30 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
VARS2Q5ST30 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VARS2Q5ST30 Y_RNA.338-201ENST00000365320 114 ntBASIC2.6□□□□□ -1.99
VARS2Q5ST30 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.6□□□□□ -1.99
VARS2Q5ST30 MIR5194-201ENST00000582634 120 ntBASIC2.6□□□□□ -1.99
VARS2Q5ST30 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.59□□□□□ -1.99
VARS2Q5ST30 SNORD114-1-201ENST00000362705 72 ntBASIC2.59□□□□□ -1.99
VARS2Q5ST30 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
VARS2Q5ST30 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
VARS2Q5ST30 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
VARS2Q5ST30 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
VARS2Q5ST30 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
VARS2Q5ST30 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VARS2Q5ST30 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VARS2Q5ST30 SNORD113.3-201ENST00000364630 78 ntBASIC2.58□□□□□ -2
VARS2Q5ST30 RNU6-364P-201ENST00000384387 107 ntBASIC2.58□□□□□ -2
VARS2Q5ST30 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
VARS2Q5ST30 MIR1273D-201ENST00000577266 86 ntBASIC2.58□□□□□ -2
VARS2Q5ST30 MIR4676-201ENST00000583078 72 ntBASIC2.58□□□□□ -2
VARS2Q5ST30 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
VARS2Q5ST30 AL359851.1-201ENST00000569460 4997 ntBASIC2.58□□□□□ -2
VARS2Q5ST30 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VARS2Q5ST30 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.57□□□□□ -2
VARS2Q5ST30 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
VARS2Q5ST30 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
VARS2Q5ST30 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 Y_RNA.246-201ENST00000364495 108 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 Y_RNA.325-201ENST00000365171 122 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 snoU13.13-201ENST00000458842 104 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 RNU7-104P-201ENST00000459398 79 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 MIR7110-201ENST00000612638 86 ntBASIC2.56□□□□□ -2
VARS2Q5ST30 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
VARS2Q5ST30 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VARS2Q5ST30 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VARS2Q5ST30 Y_RNA.32-201ENST00000362589 110 ntBASIC2.55□□□□□ -2
VARS2Q5ST30 Y_RNA.226-201ENST00000364337 114 ntBASIC2.55□□□□□ -2
VARS2Q5ST30 RPS26P5-201ENST00000418544 335 ntBASIC2.55□□□□□ -2
VARS2Q5ST30 RNU7-102P-201ENST00000458948 62 ntBASIC2.55□□□□□ -2
VARS2Q5ST30 SNORA31.14-201ENST00000516728 116 ntBASIC2.55□□□□□ -2
VARS2Q5ST30 AC027335.2-201ENST00000624030 375 ntBASIC2.55□□□□□ -2
VARS2Q5ST30 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 SNORA40B-201ENST00000385573 128 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 MT-TY-201ENST00000387409 66 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 MIR938-201ENST00000401216 83 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 HMGN2P23-201ENST00000456759 269 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 RNU1-123P-201ENST00000458950 160 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 AC036111.3-201ENST00000526389 112 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 uc_338.16-201ENST00000621804 95 ntBASIC2.54□□□□□ -2
VARS2Q5ST30 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
VARS2Q5ST30 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VARS2Q5ST30 RNU6-247P-201ENST00000362636 107 ntBASIC2.53□□□□□ -2
VARS2Q5ST30 Y_RNA.125-201ENST00000363371 111 ntBASIC2.53□□□□□ -2
VARS2Q5ST30 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
VARS2Q5ST30 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
VARS2Q5ST30 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
VARS2Q5ST30 SNORD114-4-201ENST00000363962 75 ntBASIC2.52□□□□□ -2.01
VARS2Q5ST30 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VARS2Q5ST30 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 SNORA15B-2-201ENST00000384058 135 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 RNU6-439P-201ENST00000384188 106 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 SNORA15B-1-201ENST00000384334 135 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 SNORD116-16-201ENST00000384533 92 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 RNU7-74P-201ENST00000459104 62 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 Y_RNA.633-201ENST00000459107 95 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 RNU7-40P-201ENST00000516397 64 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 MIR3664-201ENST00000579074 99 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 AC067863.3-201ENST00000624172 122 ntBASIC2.51□□□□□ -2.01
VARS2Q5ST30 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
VARS2Q5ST30 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.51□□□□□ -2.01
VARS2Q5ST30 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VARS2Q5ST30 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.5□□□□□ -2.01
VARS2Q5ST30 Y_RNA.174-201ENST00000363781 105 ntBASIC2.5□□□□□ -2.01
VARS2Q5ST30 SNORA33.1-201ENST00000364957 130 ntBASIC2.5□□□□□ -2.01
VARS2Q5ST30 RNU6-1246P-201ENST00000391064 107 ntBASIC2.5□□□□□ -2.01
VARS2Q5ST30 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VARS2Q5ST30 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
VARS2Q5ST30 SNORA67.3-201ENST00000384366 140 ntBASIC2.49□□□□□ -2.01
VARS2Q5ST30 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.49□□□□□ -2.01
VARS2Q5ST30 SNORA77B-201ENST00000578179 125 ntBASIC2.49□□□□□ -2.01
VARS2Q5ST30 MIR4658-201ENST00000584344 65 ntBASIC2.49□□□□□ -2.01
VARS2Q5ST30 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.49□□□□□ -2.01
VARS2Q5ST30 MIR1287-201ENST00000408492 90 ntBASIC2.48□□□□□ -2.01
VARS2Q5ST30 MIR4460-201ENST00000577862 86 ntBASIC2.48□□□□□ -2.01
VARS2Q5ST30 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
VARS2Q5ST30 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 243.5 ms