Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RNY1P4-201ENST00000384595 115 ntBASIC0.71□□□□□ -2.3
TTC39AQ5SRH9 MIR181B2-201ENST00000385004 89 ntBASIC0.71□□□□□ -2.3
TTC39AQ5SRH9 RNU6-469P-201ENST00000516253 101 ntBASIC0.71□□□□□ -2.3
TTC39AQ5SRH9 MIR936-201ENST00000401264 98 ntBASIC0.7□□□□□ -2.3
TTC39AQ5SRH9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.7□□□□□ -2.3
TTC39AQ5SRH9 SNORD18A-201ENST00000363753 72 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.221-201ENST00000364248 96 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 RNU6-153P-201ENST00000364422 104 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 MIR599-201ENST00000385069 95 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 RNU6-644P-201ENST00000391155 98 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.809-201ENST00000516058 95 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 AC103810.7-201ENST00000607821 91 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 AC025521.1-201ENST00000621624 286 ntBASIC0.69□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.107-201ENST00000363190 121 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 SNORD115-24-201ENST00000363528 82 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.205-201ENST00000364128 113 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 RNU6-813P-201ENST00000384691 107 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 AC244505.6-201ENST00000452829 130 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 RNU7-61P-201ENST00000515897 61 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.818-201ENST00000618813 71 ntBASIC0.68□□□□□ -2.3
TTC39AQ5SRH9 SNORD36A-201ENST00000362874 73 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 RNU6-1125P-201ENST00000363601 107 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 RNU6-480P-201ENST00000384332 107 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.495-201ENST00000384435 112 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.544-201ENST00000384650 113 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 RNU6-1254P-201ENST00000391266 104 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 AL161932.1-201ENST00000437408 146 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 AC097635.1-201ENST00000450678 155 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 MIR4439-201ENST00000583746 80 ntBASIC0.67□□□□□ -2.3
TTC39AQ5SRH9 RNU4-45P-201ENST00000365469 141 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNU6-32P-201ENST00000383948 107 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNU6-13P-201ENST00000384248 107 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNU6-12P-201ENST00000384604 107 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 SNORD28-201ENST00000384706 75 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNU6-41P-201ENST00000384741 107 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 MIR519A1-201ENST00000385257 85 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 MIR140-201ENST00000385282 100 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNU6-243P-201ENST00000391140 107 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNU6-162P-201ENST00000516228 103 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 RNA5SP94-201ENST00000516917 108 ntBASIC0.66□□□□□ -2.3
TTC39AQ5SRH9 Y_RNA.93-201ENST00000363066 109 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 SNORD114-23-201ENST00000363536 72 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 RNU6-524P-201ENST00000384270 107 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 RNU7-161P-201ENST00000517289 62 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 AL513043.2-201ENST00000573941 143 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 AP001318.4-201ENST00000616637 121 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 AC244669.1-204ENST00000621564 178 ntBASIC0.65□□□□□ -2.31
TTC39AQ5SRH9 RNU6-1260P-201ENST00000362944 107 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 SNORA36.1-201ENST00000363424 132 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 MTATP8P2-201ENST00000435212 202 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 Y_RNA.705-201ENST00000516862 110 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 AC010487.4-201ENST00000637027 61 ntBASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.64□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP89-201ENST00000410300 108 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 snoU13.11-201ENST00000459219 104 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 RNU7-104P-201ENST00000459398 79 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 RNU6-135P-201ENST00000516769 101 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP47-201ENST00000517230 109 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 MIR4639-201ENST00000584938 69 ntBASIC0.63□□□□□ -2.31
TTC39AQ5SRH9 RNU6-957P-201ENST00000363652 99 ntBASIC0.62□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP517-201ENST00000364724 117 ntBASIC0.62□□□□□ -2.31
TTC39AQ5SRH9 Y_RNA.348-201ENST00000365403 103 ntBASIC0.62□□□□□ -2.31
TTC39AQ5SRH9 RNU6-887P-201ENST00000410660 100 ntBASIC0.62□□□□□ -2.31
TTC39AQ5SRH9 RNU6-168P-201ENST00000516189 101 ntBASIC0.62□□□□□ -2.31
TTC39AQ5SRH9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP403-201ENST00000363598 108 ntBASIC0.61□□□□□ -2.31
TTC39AQ5SRH9 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
TTC39AQ5SRH9 SNORA40.13-201ENST00000516379 120 ntBASIC0.61□□□□□ -2.31
TTC39AQ5SRH9 MIR1273G-201ENST00000577677 100 ntBASIC0.61□□□□□ -2.31
TTC39AQ5SRH9 U7.3-201ENST00000616123 62 ntBASIC0.61□□□□□ -2.31
TTC39AQ5SRH9 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
TTC39AQ5SRH9 Y_RNA.190-201ENST00000363964 101 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 RNU6-905P-201ENST00000384434 107 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 RNU6-972P-201ENST00000391208 107 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP193-201ENST00000410353 107 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 Y_RNA.677-201ENST00000516401 85 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 AC092634.7-201ENST00000621022 103 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 TRDV1-202ENST00000621643 102 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TTC39AQ5SRH9 RNU6-640P-201ENST00000363693 105 ntBASIC0.59□□□□□ -2.31
TTC39AQ5SRH9 RNA5SP325-201ENST00000363756 130 ntBASIC0.59□□□□□ -2.31
TTC39AQ5SRH9 Y_RNA.290-201ENST00000364879 114 ntBASIC0.59□□□□□ -2.31
TTC39AQ5SRH9 SNORD58A-201ENST00000383875 65 ntBASIC0.59□□□□□ -2.31
TTC39AQ5SRH9 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms