Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNU7-195P-201ENST00000458793 62 ntBASIC0.67□□□□□ -2.3
CCDC144BQ3MJ40 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.67□□□□□ -2.3
CCDC144BQ3MJ40 RNU6-863P-201ENST00000515989 104 ntBASIC0.67□□□□□ -2.3
CCDC144BQ3MJ40 Y_RNA.629-201ENST00000411368 105 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 Y_RNA.659-201ENST00000515994 113 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 MIR548AI-201ENST00000579940 88 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 AC243829.3-201ENST00000622177 108 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 MIR5087-201ENST00000635826 76 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 U2.22-201ENST00000636441 106 ntBASIC0.66□□□□□ -2.3
CCDC144BQ3MJ40 RNA5SP403-201ENST00000363598 108 ntBASIC0.65□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-243P-201ENST00000391140 107 ntBASIC0.65□□□□□ -2.31
CCDC144BQ3MJ40 MIR1302-5-201ENST00000408164 150 ntBASIC0.65□□□□□ -2.31
CCDC144BQ3MJ40 MIR924-201ENST00000638017 53 ntBASIC0.65□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.163-201ENST00000363702 113 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.221-201ENST00000364248 96 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 MIR516A2-201ENST00000384888 90 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 MIR516A1-201ENST00000385033 90 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 MIR548L-201ENST00000408303 86 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 AL157398.1-201ENST00000452981 186 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 RNU7-106P-201ENST00000459514 67 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 MIR6129-201ENST00000616087 109 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
CCDC144BQ3MJ40 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.78-201ENST00000362970 110 ntBASIC0.63□□□□□ -2.31
CCDC144BQ3MJ40 SNORA25.18-201ENST00000607153 114 ntBASIC0.63□□□□□ -2.31
CCDC144BQ3MJ40 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC144BQ3MJ40 RNU2-59P-201ENST00000410482 191 ntBASIC0.62□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.601-201ENST00000410500 113 ntBASIC0.62□□□□□ -2.31
CCDC144BQ3MJ40 RNU7-104P-201ENST00000459398 79 ntBASIC0.62□□□□□ -2.31
CCDC144BQ3MJ40 RNU7-161P-201ENST00000517289 62 ntBASIC0.62□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-1113P-201ENST00000384348 107 ntBASIC0.61□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-589P-201ENST00000516485 107 ntBASIC0.61□□□□□ -2.31
CCDC144BQ3MJ40 AC090625.1-201ENST00000357130 210 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 RNA5SP457-201ENST00000363657 124 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-1163P-201ENST00000364516 107 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.258-201ENST00000364613 105 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.374-201ENST00000365606 101 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-524P-201ENST00000384270 107 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 RNA5SP330-201ENST00000517096 96 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 MIR7107-201ENST00000611489 80 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.6□□□□□ -2.31
CCDC144BQ3MJ40 Y_RNA.30-201ENST00000362572 97 ntBASIC0.59□□□□□ -2.31
CCDC144BQ3MJ40 RNU6-726P-201ENST00000364680 107 ntBASIC0.59□□□□□ -2.31
CCDC144BQ3MJ40 SNORD36A-201ENST00000362874 73 ntBASIC0.58□□□□□ -2.32
CCDC144BQ3MJ40 Y_RNA.115-201ENST00000363272 98 ntBASIC0.58□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-1126P-201ENST00000384002 107 ntBASIC0.58□□□□□ -2.32
CCDC144BQ3MJ40 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
CCDC144BQ3MJ40 SNORA68.3-201ENST00000515906 83 ntBASIC0.58□□□□□ -2.32
CCDC144BQ3MJ40 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
CCDC144BQ3MJ40 MIRLET7D-201ENST00000362263 87 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-716P-201ENST00000365621 103 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 SNORD41.1-201ENST00000391000 69 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 AC109327.2-201ENST00000448339 378 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU7-74P-201ENST00000459104 62 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-848P-201ENST00000515948 107 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-617P-201ENST00000516147 107 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-473P-201ENST00000516164 107 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU7-13P-201ENST00000516413 62 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-1049P-201ENST00000516414 107 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 Y_RNA.709-201ENST00000516952 92 ntBASIC0.57□□□□□ -2.32
CCDC144BQ3MJ40 Y_RNA.95-201ENST00000363079 95 ntBASIC0.56□□□□□ -2.32
CCDC144BQ3MJ40 Y_RNA.96-201ENST00000363092 109 ntBASIC0.56□□□□□ -2.32
CCDC144BQ3MJ40 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-1244P-201ENST00000363614 108 ntBASIC0.56□□□□□ -2.32
CCDC144BQ3MJ40 SNORD115-44-201ENST00000365391 82 ntBASIC0.56□□□□□ -2.32
CCDC144BQ3MJ40 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
CCDC144BQ3MJ40 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
CCDC144BQ3MJ40 MIR330-201ENST00000362196 94 ntBASIC0.54□□□□□ -2.32
CCDC144BQ3MJ40 SCARNA23-201ENST00000516060 130 ntBASIC0.54□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-904P-201ENST00000516206 101 ntBASIC0.54□□□□□ -2.32
CCDC144BQ3MJ40 MIR3613-201ENST00000579844 87 ntBASIC0.54□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-86P-201ENST00000606534 107 ntBASIC0.54□□□□□ -2.32
CCDC144BQ3MJ40 MIR8087-201ENST00000612745 78 ntBASIC0.54□□□□□ -2.32
CCDC144BQ3MJ40 Y_RNA.291-201ENST00000364886 113 ntBASIC0.53□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-1325P-201ENST00000364905 105 ntBASIC0.53□□□□□ -2.32
CCDC144BQ3MJ40 MIR181B2-201ENST00000385004 89 ntBASIC0.53□□□□□ -2.32
CCDC144BQ3MJ40 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-1265P-201ENST00000516342 103 ntBASIC0.53□□□□□ -2.32
CCDC144BQ3MJ40 RNU6-813P-201ENST00000384691 107 ntBASIC0.52□□□□□ -2.33
CCDC144BQ3MJ40 RNU6-466P-201ENST00000391224 103 ntBASIC0.52□□□□□ -2.33
CCDC144BQ3MJ40 AL162376.1-201ENST00000624117 175 ntBASIC0.52□□□□□ -2.33
CCDC144BQ3MJ40 RNU6-1327P-201ENST00000365302 105 ntBASIC0.51□□□□□ -2.33
CCDC144BQ3MJ40 RNU6-106P-201ENST00000384405 107 ntBASIC0.51□□□□□ -2.33
CCDC144BQ3MJ40 AC069271.1-201ENST00000445577 156 ntBASIC0.51□□□□□ -2.33
CCDC144BQ3MJ40 RNU6-1290P-201ENST00000362957 109 ntBASIC0.5□□□□□ -2.33
CCDC144BQ3MJ40 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
CCDC144BQ3MJ40 MIR3920-201ENST00000581751 86 ntBASIC0.5□□□□□ -2.33
CCDC144BQ3MJ40 AL109933.3-201ENST00000619095 188 ntBASIC0.5□□□□□ -2.33
CCDC144BQ3MJ40 AC073869.9-201ENST00000641610 120 ntBASIC0.5□□□□□ -2.33
CCDC144BQ3MJ40 RNU6-509P-201ENST00000363519 107 ntBASIC0.49□□□□□ -2.33
CCDC144BQ3MJ40 SNORA51.5-201ENST00000384126 131 ntBASIC0.49□□□□□ -2.33
CCDC144BQ3MJ40 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
CCDC144BQ3MJ40 MIR1197-201ENST00000408818 88 ntBASIC0.49□□□□□ -2.33
CCDC144BQ3MJ40 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
CCDC144BQ3MJ40 TRDV1-202ENST00000621643 102 ntBASIC0.49□□□□□ -2.33
CCDC144BQ3MJ40 RNU6-554P-201ENST00000410466 106 ntBASIC0.48□□□□□ -2.33
CCDC144BQ3MJ40 Y_RNA.818-201ENST00000618813 71 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms