Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SNORD89-201ENST00000390981 114 ntBASIC1.05□□□□□ -2.24
SF3B3Q15393 Y_RNA.593-201ENST00000410292 98 ntBASIC1.05□□□□□ -2.24
SF3B3Q15393 RNA5SP480-201ENST00000516840 109 ntBASIC1.05□□□□□ -2.24
SF3B3Q15393 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
SF3B3Q15393 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
SF3B3Q15393 Y_RNA.17-201ENST00000362433 111 ntBASIC1.04□□□□□ -2.24
SF3B3Q15393 SNORD116-22-201ENST00000384430 92 ntBASIC1.04□□□□□ -2.24
SF3B3Q15393 RNU6-535P-201ENST00000384722 107 ntBASIC1.04□□□□□ -2.24
SF3B3Q15393 MIR942-201ENST00000401111 86 ntBASIC1.04□□□□□ -2.24
SF3B3Q15393 Y_RNA.648-201ENST00000459455 110 ntBASIC1.04□□□□□ -2.24
SF3B3Q15393 RNU6-675P-201ENST00000384236 104 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 MIR520H-201ENST00000385126 88 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 RNU6-243P-201ENST00000391140 107 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 MIR1302-4-201ENST00000408701 150 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 Y_RNA.609-201ENST00000410669 89 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 MIR4668-201ENST00000582284 70 ntBASIC1.03□□□□□ -2.24
SF3B3Q15393 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SF3B3Q15393 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
SF3B3Q15393 SNORD114-26-201ENST00000363543 72 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RNA5SP245-201ENST00000364239 121 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RNU6-219P-201ENST00000364728 107 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 SNORD114-24-201ENST00000365029 72 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 MIR450A2-201ENST00000385022 100 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RNU6-402P-201ENST00000410678 103 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 Y_RNA.620-201ENST00000411009 88 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 AL161932.1-201ENST00000437408 146 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RNU7-195P-201ENST00000458793 62 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RNU7-85P-201ENST00000458851 63 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 AC138907.6-201ENST00000568401 126 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 AC138869.1-201ENST00000568623 124 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 uc_338.16-201ENST00000621804 95 ntBASIC1.02□□□□□ -2.25
SF3B3Q15393 RNU6-1260P-201ENST00000362944 107 ntBASIC1.01□□□□□ -2.25
SF3B3Q15393 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
SF3B3Q15393 AC097635.1-201ENST00000450678 155 ntBASIC1.01□□□□□ -2.25
SF3B3Q15393 Y_RNA.809-201ENST00000516058 95 ntBASIC1.01□□□□□ -2.25
SF3B3Q15393 RNA5SP255-201ENST00000516370 107 ntBASIC1.01□□□□□ -2.25
SF3B3Q15393 AC062037.1-201ENST00000605302 128 ntBASIC1.01□□□□□ -2.25
SF3B3Q15393 Y_RNA.32-201ENST00000362589 110 ntBASIC1□□□□□ -2.25
SF3B3Q15393 RNY1P4-201ENST00000384595 115 ntBASIC1□□□□□ -2.25
SF3B3Q15393 MIR7-2-201ENST00000384970 110 ntBASIC1□□□□□ -2.25
SF3B3Q15393 RNU6-519P-201ENST00000410590 108 ntBASIC1□□□□□ -2.25
SF3B3Q15393 SNORD4B-201ENST00000459083 72 ntBASIC1□□□□□ -2.25
SF3B3Q15393 snoU13.11-201ENST00000459219 104 ntBASIC1□□□□□ -2.25
SF3B3Q15393 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
SF3B3Q15393 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1□□□□□ -2.25
SF3B3Q15393 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
SF3B3Q15393 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1□□□□□ -2.25
SF3B3Q15393 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
SF3B3Q15393 RNU6-497P-201ENST00000365316 104 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 RNY4P29-201ENST00000410801 97 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 AC244505.6-201ENST00000452829 130 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 AC002350.1-201ENST00000490759 375 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 RNU6-351P-201ENST00000516097 100 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 RNU6-267P-201ENST00000516714 103 ntBASIC0.99□□□□□ -2.25
SF3B3Q15393 Y_RNA.174-201ENST00000363781 105 ntBASIC0.98□□□□□ -2.25
SF3B3Q15393 Y_RNA.283-201ENST00000364798 112 ntBASIC0.98□□□□□ -2.25
SF3B3Q15393 RNU6-820P-201ENST00000384273 107 ntBASIC0.98□□□□□ -2.25
SF3B3Q15393 MIR599-201ENST00000385069 95 ntBASIC0.98□□□□□ -2.25
SF3B3Q15393 RNU6-633P-201ENST00000362612 103 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 RNU6-957P-201ENST00000363652 99 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 Y_RNA.388-201ENST00000383919 113 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 SNORA26.2-201ENST00000390922 122 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 RNU6-75P-201ENST00000515944 104 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 RN7SKP12-201ENST00000516275 143 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 SNORA72.7-201ENST00000516349 94 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
SF3B3Q15393 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.97□□□□□ -2.25
SF3B3Q15393 MIR494-201ENST00000349529 81 ntBASIC0.96□□□□□ -2.26
SF3B3Q15393 RNY1P1-201ENST00000364372 112 ntBASIC0.96□□□□□ -2.26
SF3B3Q15393 MIR573-201ENST00000384964 99 ntBASIC0.96□□□□□ -2.26
SF3B3Q15393 RNU6-466P-201ENST00000391224 103 ntBASIC0.96□□□□□ -2.26
SF3B3Q15393 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.96□□□□□ -2.26
SF3B3Q15393 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.96□□□□□ -2.26
SF3B3Q15393 RNU6-509P-201ENST00000363519 107 ntBASIC0.95□□□□□ -2.26
SF3B3Q15393 RNU6-524P-201ENST00000384270 107 ntBASIC0.95□□□□□ -2.26
SF3B3Q15393 IGLL4P-201ENST00000614590 133 ntBASIC0.95□□□□□ -2.26
SF3B3Q15393 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 SNORD115-27-201ENST00000364430 82 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 RNA5SP117-201ENST00000365294 118 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 RNU6-1152P-201ENST00000384576 107 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 AL606490.4-201ENST00000423117 127 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 RNU6-1265P-201ENST00000516342 103 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 MIR4536-1-201ENST00000583537 88 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 TRDV1-202ENST00000621643 102 ntBASIC0.94□□□□□ -2.26
SF3B3Q15393 Y_RNA.73-201ENST00000362910 113 ntBASIC0.93□□□□□ -2.26
SF3B3Q15393 RNU6-65P-201ENST00000516332 98 ntBASIC0.93□□□□□ -2.26
SF3B3Q15393 MIR6835-201ENST00000621552 64 ntBASIC0.93□□□□□ -2.26
SF3B3Q15393 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SF3B3Q15393 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SF3B3Q15393 MIR644A-201ENST00000385262 94 ntBASIC0.92□□□□□ -2.26
SF3B3Q15393 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.26
SF3B3Q15393 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
SF3B3Q15393 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
SF3B3Q15393 Y_RNA.221-201ENST00000364248 96 ntBASIC0.91□□□□□ -2.26
SF3B3Q15393 RNU6-979P-201ENST00000383896 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms