Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 RNU6-1154P-201ENST00000391001 104 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 RNU4-61P-201ENST00000411243 107 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 RNU6-135P-201ENST00000516769 101 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 AC068339.1-201ENST00000526965 141 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 AC138869.1-201ENST00000568623 124 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 RNU7-10P-201ENST00000607194 63 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
PTCH1Q13635 RNU6-834P-201ENST00000362367 110 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 SNORD114-31-201ENST00000363219 75 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 SNORD38.1-201ENST00000363863 68 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 Y_RNA.281-201ENST00000364774 94 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 U8.6-201ENST00000364939 135 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 RNU6-571P-201ENST00000384128 107 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 RNU6-1144P-201ENST00000384247 104 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 SNORD38.2-201ENST00000384470 69 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 SNORD116-21-201ENST00000384507 92 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 SNORD28-201ENST00000384706 75 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 AC244505.6-201ENST00000452829 130 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 TRAJ51-201ENST00000504127 63 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 RNU6-469P-201ENST00000516253 101 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 RNA5SP94-201ENST00000516917 108 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 AL442128.1-201ENST00000615151 90 ntBASIC0.31□□□□□ -2.36
PTCH1Q13635 SNORA36.1-201ENST00000363424 132 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 Y_RNA.247-201ENST00000364500 92 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-1201P-201ENST00000384227 107 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MIR577-201ENST00000385196 96 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-313P-201ENST00000516317 112 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-850P-201ENST00000516934 103 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MTND5P40-201ENST00000559945 246 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MIR5009-201ENST00000578736 100 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-90P-201ENST00000606352 106 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 Y_RNA.49-201ENST00000362714 112 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-1099P-201ENST00000363533 107 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 Y_RNA.323-201ENST00000365157 109 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 Y_RNA.342-201ENST00000365352 113 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 Y_RNA.377-201ENST00000365644 108 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-880P-201ENST00000384526 107 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-476P-201ENST00000384726 107 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MIR519A1-201ENST00000385257 85 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MIR548G-201ENST00000408442 89 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-1064P-201ENST00000410626 104 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU2-51P-201ENST00000410708 197 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU7-106P-201ENST00000459514 67 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-412P-201ENST00000516434 106 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 RNA5SP47-201ENST00000517230 109 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MIR4639-201ENST00000584938 69 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 AC092634.7-201ENST00000621022 103 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 MIR6828-201ENST00000636181 60 ntBASIC0.3□□□□□ -2.36
PTCH1Q13635 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.3□□□□□ -2.36
PTCH1Q13635 RNU6-170P-201ENST00000362832 104 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 RNU6-832P-201ENST00000363319 107 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 Y_RNA.173-201ENST00000363776 113 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 Y_RNA.567-201ENST00000384736 106 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 SNORD63B-201ENST00000411005 70 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 SPINT5P-201ENST00000448174 155 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.29□□□□□ -2.36
PTCH1Q13635 MIR4694-201ENST00000578534 80 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
PTCH1Q13635 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.29□□□□□ -2.36
PTCH1Q13635 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.36
PTCH1Q13635 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 RNY3P2-201ENST00000362918 102 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 RNU6-1107P-201ENST00000364817 104 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 RNU6-1014P-201ENST00000383940 103 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 RNU6-1056P-201ENST00000383996 107 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 SNORA19-201ENST00000384737 128 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 SNORA40.8-201ENST00000411034 126 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.28□□□□□ -2.37
PTCH1Q13635 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.28□□□□□ -2.37
PTCH1Q13635 SCARNA16.5-201ENST00000517114 183 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 MIR3613-201ENST00000579844 87 ntBASIC0.28□□□□□ -2.37
PTCH1Q13635 RNU6-1260P-201ENST00000362944 107 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 SNORD115-24-201ENST00000363528 82 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNA5SP403-201ENST00000363598 108 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNU6-1229P-201ENST00000364295 107 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNU6-1163P-201ENST00000364516 107 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNU6-1081P-201ENST00000384537 107 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 MIR516A2-201ENST00000384888 90 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 MIR516A1-201ENST00000385033 90 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 MIR599-201ENST00000385069 95 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 AC097635.1-201ENST00000450678 155 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNU7-195P-201ENST00000458793 62 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 RNU7-161P-201ENST00000517289 62 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 MIR6129-201ENST00000616087 109 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.27□□□□□ -2.37
PTCH1Q13635 Y_RNA.273-201ENST00000364703 102 ntBASIC0.26□□□□□ -2.37
PTCH1Q13635 RPS29P8-201ENST00000445109 171 ntBASIC0.26□□□□□ -2.37
PTCH1Q13635 Y_RNA.809-201ENST00000516058 95 ntBASIC0.26□□□□□ -2.37
PTCH1Q13635 RNY1P9-201ENST00000532431 109 ntBASIC0.26□□□□□ -2.37
PTCH1Q13635 AC141557.1-201ENST00000540982 400 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms