Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNORD77.2-201ENST00000391045 68 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 MIR1827-201ENST00000408549 66 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 MIR4696-201ENST00000581431 70 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
PCDH1Q08174 RNU6-1229P-201ENST00000364295 107 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 SNORD90-201ENST00000391145 111 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 AC244505.6-201ENST00000452829 130 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 RNU6-1265P-201ENST00000516342 103 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 MTRNR2L2-201ENST00000604882 87 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 U7.4-201ENST00000614961 63 ntBASIC1.58□□□□□ -2.16
PCDH1Q08174 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH1Q08174 SNORA67.5-201ENST00000391036 107 ntBASIC1.57□□□□□ -2.16
PCDH1Q08174 Y_RNA.596-201ENST00000410462 109 ntBASIC1.57□□□□□ -2.16
PCDH1Q08174 AC002429.1-201ENST00000437672 148 ntBASIC1.57□□□□□ -2.16
PCDH1Q08174 RNU6-208P-201ENST00000362431 107 ntBASIC1.56□□□□□ -2.16
PCDH1Q08174 Y_RNA.226-201ENST00000364337 114 ntBASIC1.56□□□□□ -2.16
PCDH1Q08174 Y_RNA.264-201ENST00000364665 102 ntBASIC1.56□□□□□ -2.16
PCDH1Q08174 SNORA25-201ENST00000384384 134 ntBASIC1.56□□□□□ -2.16
PCDH1Q08174 SNORD13-201ENST00000459299 104 ntBASIC1.56□□□□□ -2.16
PCDH1Q08174 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
PCDH1Q08174 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
PCDH1Q08174 SNORA17.3-201ENST00000391159 129 ntBASIC1.55□□□□□ -2.16
PCDH1Q08174 MIR4498-201ENST00000577599 66 ntBASIC1.55□□□□□ -2.16
PCDH1Q08174 RMST_2.1-201ENST00000617263 136 ntBASIC1.55□□□□□ -2.16
PCDH1Q08174 MIR7111-201ENST00000619751 72 ntBASIC1.55□□□□□ -2.16
PCDH1Q08174 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDH1Q08174 MIR337-201ENST00000362281 93 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 RNA5SP327-201ENST00000362494 101 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 Y_RNA.32-201ENST00000362589 110 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 MIR520H-201ENST00000385126 88 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 MIR1287-201ENST00000408492 90 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 SNORA31.14-201ENST00000516728 116 ntBASIC1.54□□□□□ -2.16
PCDH1Q08174 RNU5F-1-201ENST00000362507 117 ntBASIC1.53□□□□□ -2.16
PCDH1Q08174 Y_RNA.118-201ENST00000363300 101 ntBASIC1.53□□□□□ -2.16
PCDH1Q08174 Y_RNA.174-201ENST00000363781 105 ntBASIC1.53□□□□□ -2.16
PCDH1Q08174 RNY4P3-201ENST00000365254 95 ntBASIC1.53□□□□□ -2.16
PCDH1Q08174 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
PCDH1Q08174 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.53□□□□□ -2.16
PCDH1Q08174 uc_338.16-201ENST00000621804 95 ntBASIC1.53□□□□□ -2.16
PCDH1Q08174 RNU6-935P-201ENST00000410371 100 ntBASIC1.52□□□□□ -2.17
PCDH1Q08174 snoU13.31-201ENST00000607291 104 ntBASIC1.52□□□□□ -2.17
PCDH1Q08174 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.52□□□□□ -2.17
PCDH1Q08174 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.52□□□□□ -2.17
PCDH1Q08174 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PCDH1Q08174 Y_RNA.207-201ENST00000364142 106 ntBASIC1.51□□□□□ -2.17
PCDH1Q08174 AC073261.1-201ENST00000429409 121 ntBASIC1.51□□□□□ -2.17
PCDH1Q08174 Y_RNA.788-201ENST00000622394 112 ntBASIC1.51□□□□□ -2.17
PCDH1Q08174 Y_RNA.532-201ENST00000384590 113 ntBASIC1.5□□□□□ -2.17
PCDH1Q08174 Y_RNA.565-201ENST00000384719 101 ntBASIC1.5□□□□□ -2.17
PCDH1Q08174 snoU13.17-201ENST00000458802 104 ntBASIC1.5□□□□□ -2.17
PCDH1Q08174 SCARNA18B-201ENST00000458806 135 ntBASIC1.5□□□□□ -2.17
PCDH1Q08174 RNU6-807P-201ENST00000516805 107 ntBASIC1.5□□□□□ -2.17
PCDH1Q08174 AL136317.1-201ENST00000612653 226 ntBASIC1.5□□□□□ -2.17
PCDH1Q08174 Y_RNA.545-201ENST00000384652 105 ntBASIC1.49□□□□□ -2.17
PCDH1Q08174 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
PCDH1Q08174 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.49□□□□□ -2.17
PCDH1Q08174 MIR1297-201ENST00000637311 77 ntBASIC1.49□□□□□ -2.17
PCDH1Q08174 Y_RNA.12-201ENST00000362393 112 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 MIR451A-201ENST00000385059 72 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 SNORD89-201ENST00000390981 114 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 RNU6-1110P-201ENST00000516462 101 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 RNU6-303P-201ENST00000517091 106 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 YWHAEP2-201ENST00000580066 112 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 YWHAEP3-201ENST00000582767 121 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 MIR3140-201ENST00000583685 90 ntBASIC1.48□□□□□ -2.17
PCDH1Q08174 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PCDH1Q08174 SNORD115-24-201ENST00000363528 82 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 SNORD115-44-201ENST00000365391 82 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 RNU4-62P-201ENST00000410125 130 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 FABP5P4-201ENST00000437203 171 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 RNU7-13P-201ENST00000516413 62 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 RNU6-1057P-201ENST00000517162 102 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 MIR4484-201ENST00000582855 83 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 ZNF209P-201ENST00000593450 2304 ntBASIC1.47□□□□□ -2.17
PCDH1Q08174 RNA5SP403-201ENST00000363598 108 ntBASIC1.46□□□□□ -2.18
PCDH1Q08174 MIR19B1-201ENST00000384829 87 ntBASIC1.46□□□□□ -2.18
PCDH1Q08174 AC002350.1-201ENST00000490759 375 ntBASIC1.46□□□□□ -2.18
PCDH1Q08174 RNU6-287P-201ENST00000516230 98 ntBASIC1.46□□□□□ -2.18
PCDH1Q08174 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.46□□□□□ -2.18
PCDH1Q08174 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
PCDH1Q08174 U7.7-201ENST00000459276 60 ntBASIC1.45□□□□□ -2.18
PCDH1Q08174 TRMT112P2-201ENST00000512910 132 ntBASIC1.45□□□□□ -2.18
PCDH1Q08174 RNA5SP117-201ENST00000365294 118 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 SNORD105-201ENST00000386910 85 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 RNU6-321P-201ENST00000410912 106 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 RNU6-1052P-201ENST00000411398 104 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 AC074348.1-201ENST00000426503 132 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 RNU6-719P-201ENST00000516671 104 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 RNU7-161P-201ENST00000517289 62 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 MIR3134-201ENST00000579433 74 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
PCDH1Q08174 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
PCDH1Q08174 SNORA24B-201ENST00000384176 131 ntBASIC1.42□□□□□ -2.18
PCDH1Q08174 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 1001.4 ms