Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC104692.1-201ENST00000472406 90 ntBASIC-0.18□□□□□ -2.44
TNFRSF9Q07011 SNORA25.13-201ENST00000516395 103 ntBASIC-0.18□□□□□ -2.44
TNFRSF9Q07011 AP001340.1-201ENST00000624405 217 ntBASIC-0.18□□□□□ -2.44
TNFRSF9Q07011 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU6-647P-201ENST00000364243 107 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 U8.6-201ENST00000364939 135 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU6-804P-201ENST00000384286 107 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 SNORD38.2-201ENST00000384470 69 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 MIR759-201ENST00000390224 91 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 MIR1912-201ENST00000410389 80 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU6-781P-201ENST00000516377 101 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU6-175P-201ENST00000516896 107 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 RNU7-188P-201ENST00000517063 64 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 AP001328.1-201ENST00000528550 176 ntBASIC-0.19□□□□□ -2.44
TNFRSF9Q07011 SNORD36A-201ENST00000362874 73 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 MIR617-201ENST00000385030 97 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 RNA5SP136-201ENST00000410906 107 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 AL158147.1-201ENST00000443970 75 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 SPINT5P-201ENST00000448174 155 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 SNORD4A-201ENST00000459174 72 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 RNU6-287P-201ENST00000516230 98 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 CR383656.4-201ENST00000546909 122 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 MIR548X2-201ENST00000579776 100 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 YWHAEP2-201ENST00000580066 112 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 U6.100-201ENST00000636230 99 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 AL512310.12-203ENST00000640543 90 ntBASIC-0.2□□□□□ -2.44
TNFRSF9Q07011 RNU6-363P-201ENST00000362895 105 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 SNORD114-31-201ENST00000363219 75 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 SNORA18.1-201ENST00000363418 128 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 SNORD114-11-201ENST00000363738 75 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 SNORD49B-201ENST00000365172 72 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 SNORD115-44-201ENST00000365391 82 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 RNU6-811P-201ENST00000384069 107 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 SNORA51.5-201ENST00000384126 131 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 MIR548D2-201ENST00000384955 97 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 RNU6-243P-201ENST00000391140 107 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 MIR2113-201ENST00000459007 91 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 RNA5SP272-201ENST00000516095 111 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 MIR3144-201ENST00000579460 79 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 AL590491.3-201ENST00000610731 82 ntBASIC-0.21□□□□□ -2.44
TNFRSF9Q07011 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 RNU6-46P-201ENST00000383860 107 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 MIR181B2-201ENST00000385004 89 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 RNU6-90P-201ENST00000606352 106 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 AC069503.3-201ENST00000618674 145 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 TRDV1-202ENST00000621643 102 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 uc_338.10-201ENST00000621872 182 ntBASIC-0.22□□□□□ -2.44
TNFRSF9Q07011 RNU6-235P-201ENST00000362644 107 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 RNU6-957P-201ENST00000363652 99 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 MIR539-201ENST00000365690 78 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 MIR548G-201ENST00000408442 89 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 AC109327.2-201ENST00000448339 378 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 RNA5SP476-201ENST00000516613 103 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 MIR4460-201ENST00000577862 86 ntBASIC-0.23□□□□□ -2.45
TNFRSF9Q07011 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 MIR148A-201ENST00000362215 68 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 SNORD38.1-201ENST00000363863 68 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 RNU6-409P-201ENST00000384114 104 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 MIR569-201ENST00000385228 96 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 SNORA49-201ENST00000386157 136 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 RNU6-182P-201ENST00000516970 105 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 MTND5P41-201ENST00000517498 206 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 U7.2-201ENST00000607576 63 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 AC145423.2-201ENST00000610631 239 ntBASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
TNFRSF9Q07011 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 RNU6-154P-201ENST00000384306 106 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 MIR196A2-201ENST00000385189 110 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 MIR652-201ENST00000385278 98 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 MT-TY-201ENST00000387409 66 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.25□□□□□ -2.45
TNFRSF9Q07011 snoU13.11-201ENST00000459219 104 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 218.4 ms