Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORD63B-201ENST00000411005 70 ntBASIC0.91□□□□□ -2.26
LTBQ06643 HAR1A.1-201ENST00000459583 118 ntBASIC0.91□□□□□ -2.26
LTBQ06643 RNA5SP330-201ENST00000517096 96 ntBASIC0.91□□□□□ -2.26
LTBQ06643 AL109933.3-201ENST00000619095 188 ntBASIC0.91□□□□□ -2.26
LTBQ06643 SNORD36A-201ENST00000362874 73 ntBASIC0.9□□□□□ -2.27
LTBQ06643 RNA5SP245-201ENST00000364239 121 ntBASIC0.9□□□□□ -2.27
LTBQ06643 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
LTBQ06643 Y_RNA.536-201ENST00000384621 113 ntBASIC0.9□□□□□ -2.27
LTBQ06643 AC092628.1-201ENST00000436250 252 ntBASIC0.9□□□□□ -2.27
LTBQ06643 AC067940.1-201ENST00000458411 300 ntBASIC0.9□□□□□ -2.27
LTBQ06643 Y_RNA.697-201ENST00000516776 113 ntBASIC0.9□□□□□ -2.27
LTBQ06643 RNU6-448P-201ENST00000517052 107 ntBASIC0.9□□□□□ -2.27
LTBQ06643 Y_RNA.56-201ENST00000362798 112 ntBASIC0.89□□□□□ -2.27
LTBQ06643 RNU6-1134P-201ENST00000365156 101 ntBASIC0.89□□□□□ -2.27
LTBQ06643 RNU6-291P-201ENST00000384720 107 ntBASIC0.89□□□□□ -2.27
LTBQ06643 MIR635-201ENST00000384830 98 ntBASIC0.89□□□□□ -2.27
LTBQ06643 RNU1-119P-201ENST00000391122 165 ntBASIC0.89□□□□□ -2.27
LTBQ06643 Y_RNA.593-201ENST00000410292 98 ntBASIC0.89□□□□□ -2.27
LTBQ06643 Y_RNA.609-201ENST00000410669 89 ntBASIC0.89□□□□□ -2.27
LTBQ06643 MIR548H5-201ENST00000580314 60 ntBASIC0.89□□□□□ -2.27
LTBQ06643 Y_RNA.17-201ENST00000362433 111 ntBASIC0.88□□□□□ -2.27
LTBQ06643 SNORD114-23-201ENST00000363536 72 ntBASIC0.88□□□□□ -2.27
LTBQ06643 RNU6-1335P-201ENST00000365426 107 ntBASIC0.88□□□□□ -2.27
LTBQ06643 Y_RNA.558-201ENST00000384685 113 ntBASIC0.88□□□□□ -2.27
LTBQ06643 RNU6-535P-201ENST00000384722 107 ntBASIC0.88□□□□□ -2.27
LTBQ06643 MIR520H-201ENST00000385126 88 ntBASIC0.88□□□□□ -2.27
LTBQ06643 RNU6-1254P-201ENST00000391266 104 ntBASIC0.88□□□□□ -2.27
LTBQ06643 RNU6-402P-201ENST00000410678 103 ntBASIC0.88□□□□□ -2.27
LTBQ06643 RNA5SP121-201ENST00000516537 101 ntBASIC0.88□□□□□ -2.27
LTBQ06643 RNU6-267P-201ENST00000516714 103 ntBASIC0.88□□□□□ -2.27
LTBQ06643 MIR942-201ENST00000401111 86 ntBASIC0.87□□□□□ -2.27
LTBQ06643 RNU7-195P-201ENST00000458793 62 ntBASIC0.87□□□□□ -2.27
LTBQ06643 snoU13.11-201ENST00000459219 104 ntBASIC0.87□□□□□ -2.27
LTBQ06643 RNU6-1110P-201ENST00000516462 101 ntBASIC0.87□□□□□ -2.27
LTBQ06643 AC062037.1-201ENST00000605302 128 ntBASIC0.87□□□□□ -2.27
LTBQ06643 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.87□□□□□ -2.27
LTBQ06643 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
LTBQ06643 AC010487.4-201ENST00000637027 61 ntBASIC0.87□□□□□ -2.27
LTBQ06643 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
LTBQ06643 RNU6-219P-201ENST00000364728 107 ntBASIC0.86□□□□□ -2.27
LTBQ06643 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
LTBQ06643 RNU6-243P-201ENST00000391140 107 ntBASIC0.86□□□□□ -2.27
LTBQ06643 FABP5P4-201ENST00000437203 171 ntBASIC0.86□□□□□ -2.27
LTBQ06643 AL161932.1-201ENST00000437408 146 ntBASIC0.86□□□□□ -2.27
LTBQ06643 RNU7-85P-201ENST00000458851 63 ntBASIC0.86□□□□□ -2.27
LTBQ06643 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
LTBQ06643 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.86□□□□□ -2.27
LTBQ06643 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.86□□□□□ -2.27
LTBQ06643 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
LTBQ06643 MIR4668-201ENST00000582284 70 ntBASIC0.86□□□□□ -2.27
LTBQ06643 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
LTBQ06643 Y_RNA.258-201ENST00000364613 105 ntBASIC0.85□□□□□ -2.27
LTBQ06643 RNU6-716P-201ENST00000365621 103 ntBASIC0.85□□□□□ -2.27
LTBQ06643 Y_RNA.388-201ENST00000383919 113 ntBASIC0.85□□□□□ -2.27
LTBQ06643 SNORD116-22-201ENST00000384430 92 ntBASIC0.85□□□□□ -2.27
LTBQ06643 SNORD105-201ENST00000386910 85 ntBASIC0.85□□□□□ -2.27
LTBQ06643 Y_RNA.648-201ENST00000459455 110 ntBASIC0.85□□□□□ -2.27
LTBQ06643 SNORA31.14-201ENST00000516728 116 ntBASIC0.85□□□□□ -2.27
LTBQ06643 AP003327.1-201ENST00000529684 127 ntBASIC0.85□□□□□ -2.27
LTBQ06643 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
LTBQ06643 RNU7-10P-201ENST00000607194 63 ntBASIC0.85□□□□□ -2.27
LTBQ06643 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
LTBQ06643 uc_338.16-201ENST00000621804 95 ntBASIC0.85□□□□□ -2.27
LTBQ06643 MIR494-201ENST00000349529 81 ntBASIC0.84□□□□□ -2.27
LTBQ06643 Y_RNA.32-201ENST00000362589 110 ntBASIC0.84□□□□□ -2.27
LTBQ06643 RNU6-957P-201ENST00000363652 99 ntBASIC0.84□□□□□ -2.27
LTBQ06643 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
LTBQ06643 MIR450A2-201ENST00000385022 100 ntBASIC0.84□□□□□ -2.27
LTBQ06643 MIR519A1-201ENST00000385257 85 ntBASIC0.84□□□□□ -2.27
LTBQ06643 RNY4P29-201ENST00000410801 97 ntBASIC0.84□□□□□ -2.27
LTBQ06643 Y_RNA.620-201ENST00000411009 88 ntBASIC0.84□□□□□ -2.27
LTBQ06643 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
LTBQ06643 SNORD4B-201ENST00000459083 72 ntBASIC0.84□□□□□ -2.27
LTBQ06643 Y_RNA.809-201ENST00000516058 95 ntBASIC0.84□□□□□ -2.27
LTBQ06643 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
LTBQ06643 AL136317.1-201ENST00000612653 226 ntBASIC0.84□□□□□ -2.27
LTBQ06643 MIR8087-201ENST00000612745 78 ntBASIC0.84□□□□□ -2.27
LTBQ06643 RNU6-675P-201ENST00000384236 104 ntBASIC0.83□□□□□ -2.28
LTBQ06643 RNU6-519P-201ENST00000410590 108 ntBASIC0.83□□□□□ -2.28
LTBQ06643 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
LTBQ06643 AC002350.1-201ENST00000490759 375 ntBASIC0.83□□□□□ -2.28
LTBQ06643 AC138907.6-201ENST00000568401 126 ntBASIC0.83□□□□□ -2.28
LTBQ06643 AC138869.1-201ENST00000568623 124 ntBASIC0.83□□□□□ -2.28
LTBQ06643 Y_RNA.73-201ENST00000362910 113 ntBASIC0.82□□□□□ -2.28
LTBQ06643 RNU6-1260P-201ENST00000362944 107 ntBASIC0.82□□□□□ -2.28
LTBQ06643 SNORD115-27-201ENST00000364430 82 ntBASIC0.82□□□□□ -2.28
LTBQ06643 RNU6-35P-201ENST00000384530 107 ntBASIC0.82□□□□□ -2.28
LTBQ06643 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
LTBQ06643 SNORA26.2-201ENST00000390922 122 ntBASIC0.82□□□□□ -2.28
LTBQ06643 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
LTBQ06643 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.82□□□□□ -2.28
LTBQ06643 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.82□□□□□ -2.28
LTBQ06643 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.82□□□□□ -2.28
LTBQ06643 Y_RNA.221-201ENST00000364248 96 ntBASIC0.81□□□□□ -2.28
LTBQ06643 Y_RNA.283-201ENST00000364798 112 ntBASIC0.81□□□□□ -2.28
LTBQ06643 RNU6-497P-201ENST00000365316 104 ntBASIC0.81□□□□□ -2.28
LTBQ06643 MIR599-201ENST00000385069 95 ntBASIC0.81□□□□□ -2.28
LTBQ06643 MIR936-201ENST00000401264 98 ntBASIC0.81□□□□□ -2.28
LTBQ06643 MIR1302-4-201ENST00000408701 150 ntBASIC0.81□□□□□ -2.28
LTBQ06643 AC244505.6-201ENST00000452829 130 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms