Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-106P-201ENST00000384405 107 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR526A2-201ENST00000390198 65 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNA5SP292-201ENST00000390974 118 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR1302-6-201ENST00000408466 90 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-935P-201ENST00000410371 100 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.38□□□□□ -2.47
COL7A1Q02388 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.38□□□□□ -2.47
COL7A1Q02388 U8.20-201ENST00000459445 131 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-62P-201ENST00000516526 102 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU2-31P-201ENST00000516954 155 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR4790-201ENST00000577799 79 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR548AG1-201ENST00000579932 66 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 AC093424.1-201ENST00000604999 338 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-90P-201ENST00000606352 106 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR376B-201ENST00000614515 100 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR6128-201ENST00000615528 109 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 AL138825.1-201ENST00000618587 192 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNA5SP26-201ENST00000362406 119 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 SNORD115-19-201ENST00000363098 82 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 SNORD115-18-201ENST00000363293 82 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-151P-201ENST00000364158 107 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-990P-201ENST00000364385 104 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 SNORD115-17-201ENST00000364612 82 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR509-1-201ENST00000385265 94 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR509-2-201ENST00000390724 91 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR548I1-201ENST00000408810 149 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 RNU6-781P-201ENST00000516377 101 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 MIR3149-201ENST00000584629 83 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 AC107308.1-201ENST00000615897 301 ntBASIC-0.38□□□□□ -2.47
COL7A1Q02388 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.38□□□□□ -2.47
COL7A1Q02388 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-879P-201ENST00000364328 108 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-696P-201ENST00000390834 107 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 DEFB108C-201ENST00000400154 252 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-65P-201ENST00000516332 98 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 AC104985.2-201ENST00000620598 500 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 U2.18-201ENST00000622185 84 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 UBE2WP1-201ENST00000362030 340 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-774P-201ENST00000363238 107 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 SNORD116-10-201ENST00000363791 102 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-704P-201ENST00000364162 103 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU1-115P-201ENST00000365329 160 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 SNORA75-201ENST00000384158 137 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 AL445567.1-201ENST00000439121 144 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-718P-201ENST00000516166 105 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-311P-201ENST00000516224 102 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNA5SP153-201ENST00000516498 76 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-256P-201ENST00000516747 97 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 SNORA20.3-201ENST00000516880 132 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-570P-201ENST00000517051 105 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-762P-201ENST00000517107 102 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 RNU2-4P-201ENST00000606190 192 ntBASIC-0.39□□□□□ -2.47
COL7A1Q02388 SNORD27-201ENST00000363981 72 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNY4P10-201ENST00000365571 96 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 SNORD116-1-201ENST00000384335 95 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR181A1-201ENST00000385026 110 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU4-43P-201ENST00000410628 137 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 AC018880.2-201ENST00000414265 201 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-358P-201ENST00000516564 75 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-521P-201ENST00000516663 105 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR466-201ENST00000580653 84 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR4696-201ENST00000581431 70 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR4490-201ENST00000582647 84 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-563P-201ENST00000364872 108 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-259P-201ENST00000383999 107 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-260P-201ENST00000384092 107 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 SNORD19-201ENST00000391191 68 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 AL606845.1-201ENST00000404881 255 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MIR548P-201ENST00000408336 84 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU6-651P-201ENST00000411040 105 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 AC022028.1-201ENST00000412054 408 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 AC024067.1-201ENST00000426199 223 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 MTND3P10-201ENST00000450967 341 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 RNU7-88P-201ENST00000458752 63 ntBASIC-0.4□□□□□ -2.47
COL7A1Q02388 SNORD4B-201ENST00000459083 72 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 367.1 ms