Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.12□□□□□ -2.39
SRPXP78539 U8.6-201ENST00000364939 135 ntBASIC0.11□□□□□ -2.39
SRPXP78539 RNU6-959P-201ENST00000384671 107 ntBASIC0.11□□□□□ -2.39
SRPXP78539 MIR643-201ENST00000385267 97 ntBASIC0.11□□□□□ -2.39
SRPXP78539 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
SRPXP78539 RNU6-243P-201ENST00000391140 107 ntBASIC0.11□□□□□ -2.39
SRPXP78539 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SRPXP78539 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SRPXP78539 RNA5SP484-201ENST00000458857 111 ntBASIC0.11□□□□□ -2.39
SRPXP78539 AL670379.3-201ENST00000605040 251 ntBASIC0.11□□□□□ -2.39
SRPXP78539 AC010487.4-201ENST00000637027 61 ntBASIC0.11□□□□□ -2.39
SRPXP78539 RNU6-832P-201ENST00000363319 107 ntBASIC0.1□□□□□ -2.39
SRPXP78539 RNU6-1163P-201ENST00000364516 107 ntBASIC0.1□□□□□ -2.39
SRPXP78539 Y_RNA.377-201ENST00000365644 108 ntBASIC0.1□□□□□ -2.39
SRPXP78539 MIR501-201ENST00000390204 84 ntBASIC0.1□□□□□ -2.39
SRPXP78539 NAMPTP3-201ENST00000569273 224 ntBASIC0.1□□□□□ -2.39
SRPXP78539 MIR4694-201ENST00000578534 80 ntBASIC0.1□□□□□ -2.39
SRPXP78539 AL365222.1-201ENST00000614661 98 ntBASIC0.1□□□□□ -2.39
SRPXP78539 PVT1_3.1-201ENST00000620853 95 ntBASIC0.1□□□□□ -2.39
SRPXP78539 TRDV1-202ENST00000621643 102 ntBASIC0.1□□□□□ -2.39
SRPXP78539 U6.100-201ENST00000636230 99 ntBASIC0.1□□□□□ -2.39
SRPXP78539 MIR924-201ENST00000638017 53 ntBASIC0.1□□□□□ -2.39
SRPXP78539 RNU6-957P-201ENST00000363652 99 ntBASIC0.09□□□□□ -2.4
SRPXP78539 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.09□□□□□ -2.4
SRPXP78539 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
SRPXP78539 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
SRPXP78539 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
SRPXP78539 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
SRPXP78539 AC104408.1-201ENST00000605241 170 ntBASIC0.09□□□□□ -2.4
SRPXP78539 uc_338.28-201ENST00000612082 187 ntBASIC0.09□□□□□ -2.4
SRPXP78539 RNY3P2-201ENST00000362918 102 ntBASIC0.08□□□□□ -2.4
SRPXP78539 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
SRPXP78539 AC006210.1-201ENST00000424882 111 ntBASIC0.08□□□□□ -2.4
SRPXP78539 TMSB4XP3-201ENST00000445144 114 ntBASIC0.08□□□□□ -2.4
SRPXP78539 AC109327.2-201ENST00000448339 378 ntBASIC0.08□□□□□ -2.4
SRPXP78539 Y_RNA.659-201ENST00000515994 113 ntBASIC0.08□□□□□ -2.4
SRPXP78539 MIR5009-201ENST00000578736 100 ntBASIC0.08□□□□□ -2.4
SRPXP78539 RN7SL793P-201ENST00000583259 296 ntBASIC0.08□□□□□ -2.4
SRPXP78539 AC096720.1-201ENST00000604441 183 ntBASIC0.08□□□□□ -2.4
SRPXP78539 AC073869.9-201ENST00000641610 120 ntBASIC0.08□□□□□ -2.4
SRPXP78539 Y_RNA.78-201ENST00000362970 110 ntBASIC0.07□□□□□ -2.4
SRPXP78539 Y_RNA.118-201ENST00000363300 101 ntBASIC0.07□□□□□ -2.4
SRPXP78539 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
SRPXP78539 RNU6-81P-201ENST00000365608 104 ntBASIC0.07□□□□□ -2.4
SRPXP78539 MIR181B2-201ENST00000385004 89 ntBASIC0.07□□□□□ -2.4
SRPXP78539 snoU13.11-201ENST00000459219 104 ntBASIC0.07□□□□□ -2.4
SRPXP78539 SNORA62.5-201ENST00000516634 120 ntBASIC0.07□□□□□ -2.4
SRPXP78539 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.07□□□□□ -2.4
SRPXP78539 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
SRPXP78539 RNU6-1244P-201ENST00000363614 108 ntBASIC0.06□□□□□ -2.4
SRPXP78539 Y_RNA.163-201ENST00000363702 113 ntBASIC0.06□□□□□ -2.4
SRPXP78539 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
SRPXP78539 SNORD116-21-201ENST00000384507 92 ntBASIC0.06□□□□□ -2.4
SRPXP78539 Y_RNA.563-201ENST00000384707 108 ntBASIC0.06□□□□□ -2.4
SRPXP78539 MIR519E-201ENST00000385075 84 ntBASIC0.06□□□□□ -2.4
SRPXP78539 SNORD110-201ENST00000408189 75 ntBASIC0.06□□□□□ -2.4
SRPXP78539 AC141557.1-201ENST00000540982 400 ntBASIC0.06□□□□□ -2.4
SRPXP78539 AC023932.2-201ENST00000603176 175 ntBASIC0.06□□□□□ -2.4
SRPXP78539 RNU6-86P-201ENST00000606534 107 ntBASIC0.06□□□□□ -2.4
SRPXP78539 AC025521.1-201ENST00000621624 286 ntBASIC0.06□□□□□ -2.4
SRPXP78539 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
SRPXP78539 RNU6-509P-201ENST00000363519 107 ntBASIC0.05□□□□□ -2.4
SRPXP78539 RNA5SP325-201ENST00000363756 130 ntBASIC0.05□□□□□ -2.4
SRPXP78539 Y_RNA.281-201ENST00000364774 94 ntBASIC0.05□□□□□ -2.4
SRPXP78539 SNORA51.5-201ENST00000384126 131 ntBASIC0.05□□□□□ -2.4
SRPXP78539 RNU6-880P-201ENST00000384526 107 ntBASIC0.05□□□□□ -2.4
SRPXP78539 MIR489-201ENST00000384923 84 ntBASIC0.05□□□□□ -2.4
SRPXP78539 MIR548H2-201ENST00000408874 88 ntBASIC0.05□□□□□ -2.4
SRPXP78539 HMGN2P22-201ENST00000427588 175 ntBASIC0.05□□□□□ -2.4
SRPXP78539 AC008267.6-201ENST00000441664 139 ntBASIC0.05□□□□□ -2.4
SRPXP78539 MIR2113-201ENST00000459007 91 ntBASIC0.05□□□□□ -2.4
SRPXP78539 RNU6-287P-201ENST00000516230 98 ntBASIC0.05□□□□□ -2.4
SRPXP78539 MIR5706-201ENST00000579841 80 ntBASIC0.05□□□□□ -2.4
SRPXP78539 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.05□□□□□ -2.4
SRPXP78539 RNU1-141P-201ENST00000364623 158 ntBASIC0.04□□□□□ -2.4
SRPXP78539 SNORD115-44-201ENST00000365391 82 ntBASIC0.04□□□□□ -2.4
SRPXP78539 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
SRPXP78539 MIR617-201ENST00000385030 97 ntBASIC0.04□□□□□ -2.4
SRPXP78539 MIR548Z-201ENST00000584743 97 ntBASIC0.04□□□□□ -2.4
SRPXP78539 MIR548AD-201ENST00000584780 82 ntBASIC0.04□□□□□ -2.4
SRPXP78539 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
SRPXP78539 RNU6-1125P-201ENST00000363601 107 ntBASIC0.03□□□□□ -2.4
SRPXP78539 RNU6-1107P-201ENST00000364817 104 ntBASIC0.03□□□□□ -2.4
SRPXP78539 RNU6-1014P-201ENST00000383940 103 ntBASIC0.03□□□□□ -2.4
SRPXP78539 RNU6-480P-201ENST00000384332 107 ntBASIC0.03□□□□□ -2.4
SRPXP78539 RNY1P4-201ENST00000384595 115 ntBASIC0.03□□□□□ -2.4
SRPXP78539 MIR193B-201ENST00000384907 83 ntBASIC0.03□□□□□ -2.4
SRPXP78539 SNORA19.1-201ENST00000410656 129 ntBASIC0.03□□□□□ -2.4
SRPXP78539 RNU7-74P-201ENST00000459104 62 ntBASIC0.03□□□□□ -2.4
SRPXP78539 MIR4514-201ENST00000581410 57 ntBASIC0.03□□□□□ -2.4
SRPXP78539 MIR4677-201ENST00000584153 80 ntBASIC0.03□□□□□ -2.4
SRPXP78539 Y_RNA.207-201ENST00000364142 106 ntBASIC0.02□□□□□ -2.41
SRPXP78539 Y_RNA.283-201ENST00000364798 112 ntBASIC0.02□□□□□ -2.41
SRPXP78539 Y_RNA.467-201ENST00000384297 102 ntBASIC0.02□□□□□ -2.41
SRPXP78539 RNU6-466P-201ENST00000391224 103 ntBASIC0.02□□□□□ -2.41
SRPXP78539 Y_RNA.596-201ENST00000410462 109 ntBASIC0.02□□□□□ -2.41
SRPXP78539 AC093423.1-201ENST00000440817 142 ntBASIC0.02□□□□□ -2.41
SRPXP78539 RNU6-782P-201ENST00000516852 104 ntBASIC0.02□□□□□ -2.41
SRPXP78539 MIR3910-1-201ENST00000580936 111 ntBASIC0.02□□□□□ -2.41
SRPXP78539 MIR3925-201ENST00000584674 77 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms