Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 Y_RNA.423-201ENST00000384057 113 ntBASIC0.24□□□□□ -2.37
IRX4P78413 Y_RNA.549-201ENST00000384657 102 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR516A2-201ENST00000384888 90 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR516A1-201ENST00000385033 90 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR548G-201ENST00000408442 89 ntBASIC0.24□□□□□ -2.37
IRX4P78413 RNU7-106P-201ENST00000459514 67 ntBASIC0.24□□□□□ -2.37
IRX4P78413 RNU6-863P-201ENST00000515989 104 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR4752-201ENST00000579672 72 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR6086-201ENST00000638065 55 ntBASIC0.24□□□□□ -2.37
IRX4P78413 MIR6759-201ENST00000638110 65 ntBASIC0.24□□□□□ -2.37
IRX4P78413 Y_RNA.35-201ENST00000362601 101 ntBASIC0.23□□□□□ -2.37
IRX4P78413 RNU6-524P-201ENST00000384270 107 ntBASIC0.23□□□□□ -2.37
IRX4P78413 TMSB4XP3-201ENST00000445144 114 ntBASIC0.23□□□□□ -2.37
IRX4P78413 MIR4679-2-201ENST00000578358 77 ntBASIC0.23□□□□□ -2.37
IRX4P78413 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
IRX4P78413 AL670379.3-201ENST00000605040 251 ntBASIC0.23□□□□□ -2.37
IRX4P78413 AL442128.1-201ENST00000615151 90 ntBASIC0.23□□□□□ -2.37
IRX4P78413 Y_RNA.57-201ENST00000362806 113 ntBASIC0.22□□□□□ -2.37
IRX4P78413 RNU6-1260P-201ENST00000362944 107 ntBASIC0.22□□□□□ -2.37
IRX4P78413 RNU6-815P-201ENST00000384080 113 ntBASIC0.22□□□□□ -2.37
IRX4P78413 RNU6-959P-201ENST00000384671 107 ntBASIC0.22□□□□□ -2.37
IRX4P78413 MIR329-2-201ENST00000385029 84 ntBASIC0.22□□□□□ -2.37
IRX4P78413 RNA5SP299-201ENST00000391203 116 ntBASIC0.22□□□□□ -2.37
IRX4P78413 RNU7-129P-201ENST00000516128 62 ntBASIC0.22□□□□□ -2.37
IRX4P78413 RNU6-90P-201ENST00000606352 106 ntBASIC0.22□□□□□ -2.37
IRX4P78413 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
IRX4P78413 Y_RNA.353-201ENST00000365440 108 ntBASIC0.2□□□□□ -2.38
IRX4P78413 MIR577-201ENST00000385196 96 ntBASIC0.2□□□□□ -2.38
IRX4P78413 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
IRX4P78413 MIR760-201ENST00000390220 80 ntBASIC0.2□□□□□ -2.38
IRX4P78413 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.2□□□□□ -2.38
IRX4P78413 RNU6-1265P-201ENST00000516342 103 ntBASIC0.2□□□□□ -2.38
IRX4P78413 RNU7-13P-201ENST00000516413 62 ntBASIC0.2□□□□□ -2.38
IRX4P78413 AC069113.3-201ENST00000521019 150 ntBASIC0.2□□□□□ -2.38
IRX4P78413 AC068339.1-201ENST00000526965 141 ntBASIC0.2□□□□□ -2.38
IRX4P78413 MIR4694-201ENST00000578534 80 ntBASIC0.2□□□□□ -2.38
IRX4P78413 AL162376.1-201ENST00000624117 175 ntBASIC0.2□□□□□ -2.38
IRX4P78413 Y_RNA.173-201ENST00000363776 113 ntBASIC0.19□□□□□ -2.38
IRX4P78413 Y_RNA.261-201ENST00000364631 102 ntBASIC0.19□□□□□ -2.38
IRX4P78413 Y_RNA.323-201ENST00000365157 109 ntBASIC0.19□□□□□ -2.38
IRX4P78413 Y_RNA.377-201ENST00000365644 108 ntBASIC0.19□□□□□ -2.38
IRX4P78413 SNORD41.1-201ENST00000391000 69 ntBASIC0.19□□□□□ -2.38
IRX4P78413 RNU6-1254P-201ENST00000391266 104 ntBASIC0.19□□□□□ -2.38
IRX4P78413 AC008267.6-201ENST00000441664 139 ntBASIC0.19□□□□□ -2.38
IRX4P78413 AC096720.1-201ENST00000604441 183 ntBASIC0.19□□□□□ -2.38
IRX4P78413 SNORA9.1-201ENST00000362412 131 ntBASIC0.18□□□□□ -2.38
IRX4P78413 U8.6-201ENST00000364939 135 ntBASIC0.18□□□□□ -2.38
IRX4P78413 RNU6-880P-201ENST00000384526 107 ntBASIC0.18□□□□□ -2.38
IRX4P78413 RNU6-269P-201ENST00000391077 97 ntBASIC0.18□□□□□ -2.38
IRX4P78413 RNU6-243P-201ENST00000391140 107 ntBASIC0.18□□□□□ -2.38
IRX4P78413 RNU1-29P-201ENST00000606574 126 ntBASIC0.18□□□□□ -2.38
IRX4P78413 RNU6-81P-201ENST00000365608 104 ntBASIC0.17□□□□□ -2.38
IRX4P78413 SNORA2A-201ENST00000383885 135 ntBASIC0.17□□□□□ -2.38
IRX4P78413 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
IRX4P78413 Y_RNA.659-201ENST00000515994 113 ntBASIC0.17□□□□□ -2.38
IRX4P78413 MIR4636-201ENST00000582271 80 ntBASIC0.17□□□□□ -2.38
IRX4P78413 SNORA70.25-201ENST00000612741 95 ntBASIC0.17□□□□□ -2.38
IRX4P78413 AL365222.1-201ENST00000614661 98 ntBASIC0.17□□□□□ -2.38
IRX4P78413 RNY3P2-201ENST00000362918 102 ntBASIC0.16□□□□□ -2.38
IRX4P78413 RNU6-832P-201ENST00000363319 107 ntBASIC0.16□□□□□ -2.38
IRX4P78413 SNORD116-21-201ENST00000384507 92 ntBASIC0.16□□□□□ -2.38
IRX4P78413 MIR5009-201ENST00000578736 100 ntBASIC0.16□□□□□ -2.38
IRX4P78413 MIR3920-201ENST00000581751 86 ntBASIC0.16□□□□□ -2.38
IRX4P78413 AC073869.9-201ENST00000641610 120 ntBASIC0.16□□□□□ -2.38
IRX4P78413 SNORD36A-201ENST00000362874 73 ntBASIC0.15□□□□□ -2.39
IRX4P78413 RNA5SP128-201ENST00000365305 116 ntBASIC0.15□□□□□ -2.39
IRX4P78413 Y_RNA.563-201ENST00000384707 108 ntBASIC0.15□□□□□ -2.39
IRX4P78413 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.15□□□□□ -2.39
IRX4P78413 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.15□□□□□ -2.39
IRX4P78413 TRDV1-202ENST00000621643 102 ntBASIC0.15□□□□□ -2.39
IRX4P78413 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
IRX4P78413 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
IRX4P78413 Y_RNA.163-201ENST00000363702 113 ntBASIC0.14□□□□□ -2.39
IRX4P78413 Y_RNA.281-201ENST00000364774 94 ntBASIC0.14□□□□□ -2.39
IRX4P78413 AL603908.1-201ENST00000406098 201 ntBASIC0.14□□□□□ -2.39
IRX4P78413 AL161932.1-201ENST00000437408 146 ntBASIC0.14□□□□□ -2.39
IRX4P78413 RNU6-848P-201ENST00000515948 107 ntBASIC0.14□□□□□ -2.39
IRX4P78413 RNU6-617P-201ENST00000516147 107 ntBASIC0.14□□□□□ -2.39
IRX4P78413 RNU6-473P-201ENST00000516164 107 ntBASIC0.14□□□□□ -2.39
IRX4P78413 RNU6-1232P-201ENST00000516299 86 ntBASIC0.14□□□□□ -2.39
IRX4P78413 RNU6-1049P-201ENST00000516414 107 ntBASIC0.14□□□□□ -2.39
IRX4P78413 MIR3910-1-201ENST00000580936 111 ntBASIC0.14□□□□□ -2.39
IRX4P78413 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
IRX4P78413 Y_RNA.78-201ENST00000362970 110 ntBASIC0.13□□□□□ -2.39
IRX4P78413 RNU6-1244P-201ENST00000363614 108 ntBASIC0.13□□□□□ -2.39
IRX4P78413 RNU6-1163P-201ENST00000364516 107 ntBASIC0.13□□□□□ -2.39
IRX4P78413 RNU6-127P-201ENST00000390897 107 ntBASIC0.13□□□□□ -2.39
IRX4P78413 RNA5SP484-201ENST00000458857 111 ntBASIC0.13□□□□□ -2.39
IRX4P78413 AC141557.1-201ENST00000540982 400 ntBASIC0.13□□□□□ -2.39
IRX4P78413 U6.100-201ENST00000636230 99 ntBASIC0.13□□□□□ -2.39
IRX4P78413 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.13□□□□□ -2.39
IRX4P78413 RNU6-509P-201ENST00000363519 107 ntBASIC0.12□□□□□ -2.39
IRX4P78413 RNU6-1125P-201ENST00000363601 107 ntBASIC0.12□□□□□ -2.39
IRX4P78413 SNORD115-44-201ENST00000365391 82 ntBASIC0.12□□□□□ -2.39
IRX4P78413 RNU6-480P-201ENST00000384332 107 ntBASIC0.12□□□□□ -2.39
IRX4P78413 MIR181B2-201ENST00000385004 89 ntBASIC0.12□□□□□ -2.39
IRX4P78413 MIR1265-201ENST00000408444 86 ntBASIC0.12□□□□□ -2.39
IRX4P78413 AC006210.1-201ENST00000424882 111 ntBASIC0.12□□□□□ -2.39
IRX4P78413 RNU7-74P-201ENST00000459104 62 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms