Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
ERVFC1P60507 SNORD111-201ENST00000408139 94 ntBASIC1.61□□□□□ -2.15
ERVFC1P60507 SNORD83.1-201ENST00000411362 77 ntBASIC1.61□□□□□ -2.15
ERVFC1P60507 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
ERVFC1P60507 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
ERVFC1P60507 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
ERVFC1P60507 RNU6-664P-201ENST00000362381 107 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 Y_RNA.239-201ENST00000364444 113 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 RNU6-1051P-201ENST00000365471 102 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 SNORD90-201ENST00000391145 111 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 AL606490.4-201ENST00000423117 127 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 AC048334.1-201ENST00000477975 159 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 RNU6-539P-201ENST00000516665 103 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 AC138907.6-201ENST00000568401 126 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 AC138869.1-201ENST00000568623 124 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 AC106800.4-201ENST00000614905 153 ntBASIC1.6□□□□□ -2.15
ERVFC1P60507 RNU5F-1-201ENST00000362507 117 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 RNY4P3-201ENST00000365254 95 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 SNORA75.2-201ENST00000391138 150 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 SNORA75.3-201ENST00000391231 150 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 RNU6-871P-201ENST00000516122 100 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 Y_RNA.681-201ENST00000516445 113 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 Y_RNA.697-201ENST00000516776 113 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 RNU6-1015P-201ENST00000517121 99 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 MIR4696-201ENST00000581431 70 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
ERVFC1P60507 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
ERVFC1P60507 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ERVFC1P60507 SNORD101-201ENST00000384027 73 ntBASIC1.58□□□□□ -2.16
ERVFC1P60507 RPS26P5-201ENST00000418544 335 ntBASIC1.58□□□□□ -2.16
ERVFC1P60507 RNU1-123P-201ENST00000458950 160 ntBASIC1.58□□□□□ -2.16
ERVFC1P60507 RNU6-687P-201ENST00000516443 89 ntBASIC1.58□□□□□ -2.16
ERVFC1P60507 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ERVFC1P60507 Y_RNA.12-201ENST00000362393 112 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 Y_RNA.330-201ENST00000365230 109 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 Y_RNA.363-201ENST00000365529 113 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 snoU13.17-201ENST00000458802 104 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 RNU6-1265P-201ENST00000516342 103 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 RNU6-70P-201ENST00000516438 60 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 RNA5SP102-201ENST00000516865 106 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 RNU7-156P-201ENST00000517214 74 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 MIR4771-2-201ENST00000577758 74 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 MIR4771-1-201ENST00000582617 74 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 U6.100-201ENST00000636230 99 ntBASIC1.57□□□□□ -2.16
ERVFC1P60507 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 Y_RNA.596-201ENST00000410462 109 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 AL591704.2-201ENST00000421658 181 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 RNU6-634P-201ENST00000459134 106 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
ERVFC1P60507 Y_RNA.36-201ENST00000362602 112 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 Y_RNA.207-201ENST00000364142 106 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 MIR599-201ENST00000385069 95 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 RNU7-21P-201ENST00000459430 62 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 MIR4484-201ENST00000582855 83 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 MIR4452-201ENST00000583004 71 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 MIR4676-201ENST00000583078 72 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.55□□□□□ -2.16
ERVFC1P60507 RNU6-369P-201ENST00000362515 102 ntBASIC1.54□□□□□ -2.16
ERVFC1P60507 MIR942-201ENST00000401111 86 ntBASIC1.54□□□□□ -2.16
ERVFC1P60507 Y_RNA.606-201ENST00000410579 103 ntBASIC1.54□□□□□ -2.16
ERVFC1P60507 AC244505.6-201ENST00000452829 130 ntBASIC1.54□□□□□ -2.16
ERVFC1P60507 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ERVFC1P60507 RNU6-340P-201ENST00000364005 107 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 SNORA80D-201ENST00000384488 135 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 RNU6-291P-201ENST00000384720 107 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 RNU6-587P-201ENST00000391282 106 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 MIR938-201ENST00000401216 83 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 RNU6-935P-201ENST00000410371 100 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 RNU2-59P-201ENST00000410482 191 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 RNU7-40P-201ENST00000516397 64 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
ERVFC1P60507 SNORD114-22-201ENST00000365423 72 ntBASIC1.52□□□□□ -2.17
ERVFC1P60507 SNORA24B-201ENST00000384176 131 ntBASIC1.52□□□□□ -2.17
ERVFC1P60507 RNU6-535P-201ENST00000384722 107 ntBASIC1.52□□□□□ -2.17
ERVFC1P60507 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.52□□□□□ -2.17
ERVFC1P60507 AC008608.1-201ENST00000603910 127 ntBASIC1.52□□□□□ -2.17
ERVFC1P60507 AC027335.2-201ENST00000624030 375 ntBASIC1.52□□□□□ -2.17
ERVFC1P60507 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
ERVFC1P60507 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ERVFC1P60507 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
ERVFC1P60507 RNU6-681P-201ENST00000364012 104 ntBASIC1.51□□□□□ -2.17
ERVFC1P60507 RNA5SP245-201ENST00000364239 121 ntBASIC1.51□□□□□ -2.17
ERVFC1P60507 RNU6-364P-201ENST00000384387 107 ntBASIC1.51□□□□□ -2.17
ERVFC1P60507 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.51□□□□□ -2.17
ERVFC1P60507 AC097510.1-201ENST00000510945 133 ntBASIC1.51□□□□□ -2.17
ERVFC1P60507 RNU6-154P-201ENST00000384306 106 ntBASIC1.5□□□□□ -2.17
ERVFC1P60507 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
ERVFC1P60507 RNU7-56P-201ENST00000458744 62 ntBASIC1.5□□□□□ -2.17
ERVFC1P60507 RNU7-102P-201ENST00000458948 62 ntBASIC1.5□□□□□ -2.17
ERVFC1P60507 RNU7-90P-201ENST00000459216 62 ntBASIC1.5□□□□□ -2.17
ERVFC1P60507 SNORD79.1-201ENST00000516069 84 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms