Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.44□□□□□ -2.48
SMSP52788 IGKV1-22-201ENST00000524313 326 ntBASIC-0.44□□□□□ -2.48
SMSP52788 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.44□□□□□ -2.48
SMSP52788 MIR3666-201ENST00000607845 111 ntBASIC-0.44□□□□□ -2.48
SMSP52788 SNORD49B-201ENST00000365172 72 ntBASIC-0.45□□□□□ -2.48
SMSP52788 MIR516A2-201ENST00000384888 90 ntBASIC-0.45□□□□□ -2.48
SMSP52788 MIR224-201ENST00000384889 81 ntBASIC-0.45□□□□□ -2.48
SMSP52788 MIR516A1-201ENST00000385033 90 ntBASIC-0.45□□□□□ -2.48
SMSP52788 MIR519E-201ENST00000385075 84 ntBASIC-0.45□□□□□ -2.48
SMSP52788 MT-TG-201ENST00000387429 68 ntBASIC-0.45□□□□□ -2.48
SMSP52788 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.45□□□□□ -2.48
SMSP52788 MIR548AG2-201ENST00000581228 64 ntBASIC-0.45□□□□□ -2.48
SMSP52788 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.45□□□□□ -2.48
SMSP52788 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.46□□□□□ -2.48
SMSP52788 RNU6-915P-201ENST00000364943 103 ntBASIC-0.46□□□□□ -2.48
SMSP52788 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.46□□□□□ -2.48
SMSP52788 MIR759-201ENST00000390224 91 ntBASIC-0.46□□□□□ -2.48
SMSP52788 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
SMSP52788 RN7SL660P-201ENST00000614852 299 ntBASIC-0.46□□□□□ -2.48
SMSP52788 AP001340.1-201ENST00000624405 217 ntBASIC-0.46□□□□□ -2.48
SMSP52788 AC021753.1-201ENST00000635724 168 ntBASIC-0.46□□□□□ -2.48
SMSP52788 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.47□□□□□ -2.48
SMSP52788 RNU6-647P-201ENST00000364243 107 ntBASIC-0.47□□□□□ -2.48
SMSP52788 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.47□□□□□ -2.48
SMSP52788 RNA5SP67-201ENST00000516422 131 ntBASIC-0.47□□□□□ -2.48
SMSP52788 MIR655-201ENST00000362159 97 ntBASIC-0.48□□□□□ -2.49
SMSP52788 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.48□□□□□ -2.49
SMSP52788 RNU6-460P-201ENST00000391158 108 ntBASIC-0.48□□□□□ -2.49
SMSP52788 RNA5SP300-201ENST00000391197 107 ntBASIC-0.48□□□□□ -2.49
SMSP52788 AC244250.2-201ENST00000418731 148 ntBASIC-0.48□□□□□ -2.49
SMSP52788 RNU6-138P-201ENST00000515952 107 ntBASIC-0.48□□□□□ -2.49
SMSP52788 RN7SKP19-201ENST00000516016 252 ntBASIC-0.48□□□□□ -2.49
SMSP52788 MIR6507-201ENST00000613630 70 ntBASIC-0.48□□□□□ -2.49
SMSP52788 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.49□□□□□ -2.49
SMSP52788 RNU6-379P-201ENST00000363813 104 ntBASIC-0.49□□□□□ -2.49
SMSP52788 RNU6-151P-201ENST00000364158 107 ntBASIC-0.49□□□□□ -2.49
SMSP52788 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.49□□□□□ -2.49
SMSP52788 uc_338.10-201ENST00000621872 182 ntBASIC-0.49□□□□□ -2.49
SMSP52788 RNU6-811P-201ENST00000384069 107 ntBASIC-0.5□□□□□ -2.49
SMSP52788 MIR181B2-201ENST00000385004 89 ntBASIC-0.5□□□□□ -2.49
SMSP52788 MIR513C-201ENST00000401352 84 ntBASIC-0.5□□□□□ -2.49
SMSP52788 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.5□□□□□ -2.49
SMSP52788 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.5□□□□□ -2.49
SMSP52788 MIR4473-201ENST00000583731 91 ntBASIC-0.5□□□□□ -2.49
SMSP52788 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.51□□□□□ -2.49
SMSP52788 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.51□□□□□ -2.49
SMSP52788 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.51□□□□□ -2.49
SMSP52788 MIR2113-201ENST00000459007 91 ntBASIC-0.51□□□□□ -2.49
SMSP52788 snoU13.11-201ENST00000459219 104 ntBASIC-0.51□□□□□ -2.49
SMSP52788 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.51□□□□□ -2.49
SMSP52788 MIR1255B1-201ENST00000636325 63 ntBASIC-0.51□□□□□ -2.49
SMSP52788 SNORD36A-201ENST00000362874 73 ntBASIC-0.52□□□□□ -2.49
SMSP52788 RNU6-363P-201ENST00000362895 105 ntBASIC-0.52□□□□□ -2.49
SMSP52788 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
SMSP52788 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
SMSP52788 U8.6-201ENST00000364939 135 ntBASIC-0.52□□□□□ -2.49
SMSP52788 RNU6-394P-201ENST00000410735 107 ntBASIC-0.52□□□□□ -2.49
SMSP52788 RNU7-188P-201ENST00000517063 64 ntBASIC-0.52□□□□□ -2.49
SMSP52788 AP001328.1-201ENST00000528550 176 ntBASIC-0.52□□□□□ -2.49
SMSP52788 YWHAEP2-201ENST00000580066 112 ntBASIC-0.52□□□□□ -2.49
SMSP52788 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.52□□□□□ -2.49
SMSP52788 MIR548D2-201ENST00000384955 97 ntBASIC-0.53□□□□□ -2.49
SMSP52788 RNU6-243P-201ENST00000391140 107 ntBASIC-0.53□□□□□ -2.49
SMSP52788 AC074198.2-201ENST00000508153 258 ntBASIC-0.53□□□□□ -2.49
SMSP52788 RNU6-287P-201ENST00000516230 98 ntBASIC-0.53□□□□□ -2.49
SMSP52788 MIR4460-201ENST00000577862 86 ntBASIC-0.53□□□□□ -2.49
SMSP52788 AC004792.1-201ENST00000614523 137 ntBASIC-0.53□□□□□ -2.49
SMSP52788 MIR4788-201ENST00000639104 80 ntBASIC-0.53□□□□□ -2.49
SMSP52788 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.54□□□□□ -2.5
SMSP52788 SNORD38.1-201ENST00000363863 68 ntBASIC-0.54□□□□□ -2.5
SMSP52788 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.54□□□□□ -2.5
SMSP52788 AC096531.1-201ENST00000419107 107 ntBASIC-0.54□□□□□ -2.5
SMSP52788 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
SMSP52788 MIR548AE1-201ENST00000583292 70 ntBASIC-0.54□□□□□ -2.5
SMSP52788 MIR4263-201ENST00000584745 83 ntBASIC-0.54□□□□□ -2.5
SMSP52788 RNU6-90P-201ENST00000606352 106 ntBASIC-0.54□□□□□ -2.5
SMSP52788 TRDV1-202ENST00000621643 102 ntBASIC-0.54□□□□□ -2.5
SMSP52788 AL162726.3-218ENST00000636401 95 ntBASIC-0.54□□□□□ -2.5
SMSP52788 SNORD114-29-201ENST00000364819 70 ntBASIC-0.55□□□□□ -2.5
SMSP52788 SNORD14C-201ENST00000365382 88 ntBASIC-0.55□□□□□ -2.5
SMSP52788 MT-TY-201ENST00000387409 66 ntBASIC-0.55□□□□□ -2.5
SMSP52788 MIR548X2-201ENST00000579776 100 ntBASIC-0.55□□□□□ -2.5
SMSP52788 AL512310.12-203ENST00000640543 90 ntBASIC-0.55□□□□□ -2.5
SMSP52788 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.56□□□□□ -2.5
SMSP52788 SNORD114-11-201ENST00000363738 75 ntBASIC-0.56□□□□□ -2.5
SMSP52788 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.56□□□□□ -2.5
SMSP52788 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.56□□□□□ -2.5
SMSP52788 SNORA51.5-201ENST00000384126 131 ntBASIC-0.56□□□□□ -2.5
SMSP52788 MIR548G-201ENST00000408442 89 ntBASIC-0.56□□□□□ -2.5
SMSP52788 AL158147.1-201ENST00000443970 75 ntBASIC-0.56□□□□□ -2.5
SMSP52788 RNU6-388P-201ENST00000517012 105 ntBASIC-0.56□□□□□ -2.5
SMSP52788 RNU6-389P-201ENST00000517048 105 ntBASIC-0.56□□□□□ -2.5
SMSP52788 AL590491.3-201ENST00000610731 82 ntBASIC-0.56□□□□□ -2.5
SMSP52788 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.56□□□□□ -2.5
SMSP52788 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.57□□□□□ -2.5
SMSP52788 MIR196A2-201ENST00000385189 110 ntBASIC-0.57□□□□□ -2.5
SMSP52788 MIR1263-201ENST00000408324 86 ntBASIC-0.57□□□□□ -2.5
SMSP52788 RNU6-735P-201ENST00000410612 107 ntBASIC-0.57□□□□□ -2.5
SMSP52788 SNORA7.5-201ENST00000410672 110 ntBASIC-0.57□□□□□ -2.5
SMSP52788 SPINT5P-201ENST00000448174 155 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms