Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNU6-834P-201ENST00000362367 110 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.96-201ENST00000363092 109 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.601-201ENST00000410500 113 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 uc_338.17-201ENST00000619633 179 ntBASIC0.43□□□□□ -2.34
HCFC1P51610 Y_RNA.342-201ENST00000365352 113 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 RNU6-1126P-201ENST00000384002 107 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 AC141557.1-201ENST00000540982 400 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 AL513043.2-201ENST00000573941 143 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 SNORD71-201ENST00000411292 86 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 RNU6-1057P-201ENST00000517162 102 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 RNU6-537P-201ENST00000517277 103 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 uc_338.28-201ENST00000612082 187 ntBASIC0.42□□□□□ -2.34
HCFC1P51610 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
HCFC1P51610 SNORA9.1-201ENST00000362412 131 ntBASIC0.41□□□□□ -2.34
HCFC1P51610 SNORD63B-201ENST00000411005 70 ntBASIC0.41□□□□□ -2.34
HCFC1P51610 Y_RNA.659-201ENST00000515994 113 ntBASIC0.41□□□□□ -2.34
HCFC1P51610 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HCFC1P51610 MIR450A1-201ENST00000362262 91 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 Y_RNA.57-201ENST00000362806 113 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 SNORD116-10-201ENST00000363791 102 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 AL031737.1-201ENST00000450125 223 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 AC244505.6-201ENST00000452829 130 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 RNA5SP94-201ENST00000516917 108 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 AC067863.3-201ENST00000624172 122 ntBASIC0.4□□□□□ -2.34
HCFC1P51610 RNU6-766P-201ENST00000362478 107 ntBASIC0.4□□□□□ -2.35
HCFC1P51610 Y_RNA.163-201ENST00000363702 113 ntBASIC0.4□□□□□ -2.35
HCFC1P51610 MIR519A1-201ENST00000385257 85 ntBASIC0.4□□□□□ -2.35
HCFC1P51610 RNU6-863P-201ENST00000515989 104 ntBASIC0.4□□□□□ -2.35
HCFC1P51610 RNU6-957P-201ENST00000363652 99 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 Y_RNA.323-201ENST00000365157 109 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 MIR548G-201ENST00000408442 89 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.39□□□□□ -2.35
HCFC1P51610 SNORA40.13-201ENST00000516379 120 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 MIR4439-201ENST00000583746 80 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 U6.100-201ENST00000636230 99 ntBASIC0.39□□□□□ -2.35
HCFC1P51610 Y_RNA.261-201ENST00000364631 102 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 MIR8066-201ENST00000617280 78 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HCFC1P51610 RNU6-1290P-201ENST00000362957 109 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 SNORA8.2-201ENST00000384372 139 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 RNU6-972P-201ENST00000391208 107 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 Y_RNA.596-201ENST00000410462 109 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 RNU7-195P-201ENST00000458793 62 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 AC025521.1-201ENST00000621624 286 ntBASIC0.38□□□□□ -2.35
HCFC1P51610 Y_RNA.98-201ENST00000363109 102 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNU6-1125P-201ENST00000363601 107 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNU6-480P-201ENST00000384332 107 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 SNORA7.5-201ENST00000410672 110 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 SNORA40.8-201ENST00000411034 126 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 AC073261.1-201ENST00000429409 121 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNU7-104P-201ENST00000459398 79 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNU6-904P-201ENST00000516206 101 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNU6-664P-201ENST00000362381 107 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 Y_RNA.107-201ENST00000363190 121 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 Y_RNA.178-201ENST00000363832 102 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNA5SP245-201ENST00000364239 121 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNU6-44P-201ENST00000384045 107 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 Y_RNA.467-201ENST00000384297 102 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 MIR644A-201ENST00000385262 94 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 RNA5SP63-201ENST00000391225 112 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 Y_RNA.681-201ENST00000516445 113 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 AP001318.4-201ENST00000616637 121 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
HCFC1P51610 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.37□□□□□ -2.35
HCFC1P51610 RNU6-466P-201ENST00000391224 103 ntBASIC0.36□□□□□ -2.35
HCFC1P51610 SCARNA23-201ENST00000516060 130 ntBASIC0.36□□□□□ -2.35
HCFC1P51610 AL109933.3-201ENST00000619095 188 ntBASIC0.36□□□□□ -2.35
HCFC1P51610 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 RNY4P18-201ENST00000391107 89 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 RNU7-13P-201ENST00000516413 62 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 RNA5SP121-201ENST00000516537 101 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 Y_RNA.705-201ENST00000516862 110 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 MIR4536-1-201ENST00000583537 88 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 Y_RNA.95-201ENST00000363079 95 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 RNU6-1229P-201ENST00000364295 107 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 RNU6-291P-201ENST00000384720 107 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
HCFC1P51610 SPINT5P-201ENST00000448174 155 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 MIR4777-201ENST00000583710 86 ntBASIC0.35□□□□□ -2.35
HCFC1P51610 Y_RNA.423-201ENST00000384057 113 ntBASIC0.34□□□□□ -2.36
HCFC1P51610 MIR599-201ENST00000385069 95 ntBASIC0.34□□□□□ -2.36
HCFC1P51610 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
HCFC1P51610 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
HCFC1P51610 Y_RNA.173-201ENST00000363776 113 ntBASIC0.33□□□□□ -2.36
HCFC1P51610 SNORA2A-201ENST00000383885 135 ntBASIC0.33□□□□□ -2.36
HCFC1P51610 MIR590-201ENST00000385008 97 ntBASIC0.33□□□□□ -2.36
HCFC1P51610 MIR216B-201ENST00000390186 82 ntBASIC0.33□□□□□ -2.36
HCFC1P51610 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.33□□□□□ -2.36
HCFC1P51610 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
HCFC1P51610 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 259.2 ms