Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 MIR2909-201ENST00000617113 69 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.04□□□□□ -2.42
LIG4P49917 U6.100-201ENST00000636230 99 ntBASIC-0.04□□□□□ -2.42
LIG4P49917 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 RNU6-929P-201ENST00000384429 107 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 MIR876-201ENST00000401147 81 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 MIR548AE1-201ENST00000583292 70 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 RN7SL660P-201ENST00000614852 299 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 AL035470.1-201ENST00000622571 220 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 AC073869.9-201ENST00000641610 120 ntBASIC-0.05□□□□□ -2.42
LIG4P49917 MIR655-201ENST00000362159 97 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 MIR759-201ENST00000390224 91 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 MIR548I1-201ENST00000408810 149 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 RNU7-107P-201ENST00000459121 61 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 AC025166.1-201ENST00000612411 163 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 MTND5P18-201ENST00000445624 1801 ntBASIC-0.06□□□□□ -2.42
LIG4P49917 RNU6-957P-201ENST00000363652 99 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 RNY1P5-201ENST00000383890 115 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 RNU6-907P-201ENST00000390924 102 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 AC006210.1-201ENST00000424882 111 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.07□□□□□ -2.42
LIG4P49917 RNU6-75P-201ENST00000515944 104 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 RNU6-772P-201ENST00000516042 105 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 RNU6-287P-201ENST00000516230 98 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 RNU6-175P-201ENST00000516896 107 ntBASIC-0.07□□□□□ -2.42
LIG4P49917 MIR106A-201ENST00000384870 81 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 MIR617-201ENST00000385030 97 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 MIR577-201ENST00000385196 96 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
LIG4P49917 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 SNORD110-201ENST00000408189 75 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 MIR548G-201ENST00000408442 89 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 MIR2113-201ENST00000459007 91 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 SNORA25.13-201ENST00000516395 103 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 RNU7-13P-201ENST00000516413 62 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 RNA5SP285-201ENST00000516619 119 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 U7.6-201ENST00000610841 64 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 MIR6507-201ENST00000613630 70 ntBASIC-0.08□□□□□ -2.42
LIG4P49917 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.09□□□□□ -2.42
LIG4P49917 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.09□□□□□ -2.42
LIG4P49917 snoU13.11-201ENST00000459219 104 ntBASIC-0.09□□□□□ -2.42
LIG4P49917 AC141557.1-201ENST00000540982 400 ntBASIC-0.09□□□□□ -2.42
LIG4P49917 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.09□□□□□ -2.42
LIG4P49917 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.09□□□□□ -2.42
LIG4P49917 TRDV1-202ENST00000621643 102 ntBASIC-0.09□□□□□ -2.42
LIG4P49917 SNORD38.1-201ENST00000363863 68 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 SNORA32.1-201ENST00000364514 115 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 SNORA51.5-201ENST00000384126 131 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 MIR892B-201ENST00000401279 77 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 AC145423.2-201ENST00000610631 239 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.1□□□□□ -2.43
LIG4P49917 AL442128.1-201ENST00000615151 90 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 AL162726.3-218ENST00000636401 95 ntBASIC-0.1□□□□□ -2.43
LIG4P49917 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-509P-201ENST00000363519 107 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNY4P6-201ENST00000363667 96 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-652P-201ENST00000365488 107 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6V-201ENST00000384105 107 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-409P-201ENST00000384114 104 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 MIR329-2-201ENST00000385029 84 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 SNORA49-201ENST00000386157 136 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 MT-TY-201ENST00000387409 66 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 MT-TR-201ENST00000387439 65 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 SNORA40-201ENST00000388090 126 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-816P-201ENST00000390914 107 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNA5SP163-201ENST00000410304 99 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.11□□□□□ -2.43
LIG4P49917 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-659P-201ENST00000516454 104 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 RNU6-971P-201ENST00000516920 106 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 AC007012.1-201ENST00000567192 175 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 MIR4696-201ENST00000581431 70 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 MIR548Z-201ENST00000584743 97 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 AL670379.3-201ENST00000605040 251 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 AC069503.3-201ENST00000618674 145 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 AC025521.1-201ENST00000621624 286 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 MIR3914-2-201ENST00000637339 95 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 AL512310.12-203ENST00000640543 90 ntBASIC-0.11□□□□□ -2.43
LIG4P49917 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 RNA5SP205-201ENST00000364653 136 ntBASIC-0.12□□□□□ -2.43
LIG4P49917 MIR539-201ENST00000365690 78 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms