Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.17□□□□□ -2.44
CDX1P47902 RNU6-409P-201ENST00000384114 104 ntBASIC-0.17□□□□□ -2.44
CDX1P47902 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.17□□□□□ -2.44
CDX1P47902 RNU6-243P-201ENST00000391140 107 ntBASIC-0.17□□□□□ -2.44
CDX1P47902 AC025166.1-201ENST00000612411 163 ntBASIC-0.17□□□□□ -2.44
CDX1P47902 AC084368.1-201ENST00000620935 65 ntBASIC-0.17□□□□□ -2.44
CDX1P47902 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.18□□□□□ -2.44
CDX1P47902 SNORD115-44-201ENST00000365391 82 ntBASIC-0.18□□□□□ -2.44
CDX1P47902 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.18□□□□□ -2.44
CDX1P47902 RNU6-929P-201ENST00000384429 107 ntBASIC-0.18□□□□□ -2.44
CDX1P47902 RNU6-426P-201ENST00000516464 97 ntBASIC-0.18□□□□□ -2.44
CDX1P47902 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 MIR214-201ENST00000385214 110 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 SNORA75.1-201ENST00000391130 148 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 HMGN2P22-201ENST00000427588 175 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.19□□□□□ -2.44
CDX1P47902 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 MIR3925-201ENST00000584674 77 ntBASIC-0.19□□□□□ -2.44
CDX1P47902 SNORD38.1-201ENST00000363863 68 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 RNU1-141P-201ENST00000364623 158 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 RNU6-35P-201ENST00000384530 107 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 MIR548G-201ENST00000408442 89 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 AC104692.1-201ENST00000472406 90 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 MIR5589-201ENST00000579442 60 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 MIR4802-201ENST00000581881 80 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 MIR4636-201ENST00000582271 80 ntBASIC-0.2□□□□□ -2.44
CDX1P47902 SNORD114-31-201ENST00000363219 75 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 MIR617-201ENST00000385030 97 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 MIR1912-201ENST00000410389 80 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 RNU7-165P-201ENST00000458864 60 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 SNORA25.13-201ENST00000516395 103 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
CDX1P47902 MTND5P18-201ENST00000445624 1801 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 SNORD58C-201ENST00000365223 64 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 MIR516B1-201ENST00000385211 90 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 RNA5SP395-201ENST00000516567 118 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 IGLVI-20-201ENST00000519296 130 ntBASIC-0.22□□□□□ -2.44
CDX1P47902 RNU6-161P-201ENST00000363051 106 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 MIR519E-201ENST00000385075 84 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 SNORA40-201ENST00000388090 126 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 RNU6-816P-201ENST00000390914 107 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 MTND4LP9-201ENST00000427694 174 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 MIR6514-201ENST00000622549 70 ntBASIC-0.23□□□□□ -2.45
CDX1P47902 SNORD36A-201ENST00000362874 73 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.24□□□□□ -2.45
CDX1P47902 RNU7-200P-201ENST00000516105 62 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 RNU6-180P-201ENST00000516697 61 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 RNU6-794P-201ENST00000517261 64 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.24□□□□□ -2.45
CDX1P47902 TRDV1-202ENST00000621643 102 ntBASIC-0.24□□□□□ -2.45
CDX1P47902 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.25□□□□□ -2.45
CDX1P47902 RNU6-287P-201ENST00000516230 98 ntBASIC-0.25□□□□□ -2.45
CDX1P47902 MIR4460-201ENST00000577862 86 ntBASIC-0.25□□□□□ -2.45
CDX1P47902 MIR548AG2-201ENST00000581228 64 ntBASIC-0.25□□□□□ -2.45
CDX1P47902 MIR4473-201ENST00000583731 91 ntBASIC-0.25□□□□□ -2.45
CDX1P47902 AL442128.1-201ENST00000615151 90 ntBASIC-0.25□□□□□ -2.45
CDX1P47902 AL161932.1-201ENST00000437408 146 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 MIR2113-201ENST00000459007 91 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 YWHAEP2-201ENST00000580066 112 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 AC069503.3-201ENST00000618674 145 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 uc_338.10-201ENST00000621872 182 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 AL162726.3-218ENST00000636401 95 ntBASIC-0.26□□□□□ -2.45
CDX1P47902 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.27□□□□□ -2.45
CDX1P47902 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.27□□□□□ -2.45
CDX1P47902 AL353813.1-201ENST00000440700 253 ntBASIC-0.27□□□□□ -2.45
CDX1P47902 SNORD4A-201ENST00000459174 72 ntBASIC-0.27□□□□□ -2.45
CDX1P47902 AC096720.1-201ENST00000604441 183 ntBASIC-0.27□□□□□ -2.45
CDX1P47902 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
CDX1P47902 SNORA51.5-201ENST00000384126 131 ntBASIC-0.28□□□□□ -2.45
CDX1P47902 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.28□□□□□ -2.45
CDX1P47902 CR383656.4-201ENST00000546909 122 ntBASIC-0.28□□□□□ -2.45
CDX1P47902 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
CDX1P47902 AP001180.6-201ENST00000584918 159 ntBASIC-0.28□□□□□ -2.45
CDX1P47902 AL157777.2-201ENST00000258070 137 ntBASIC-0.29□□□□□ -2.46
CDX1P47902 MIR539-201ENST00000365690 78 ntBASIC-0.29□□□□□ -2.46
CDX1P47902 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.29□□□□□ -2.46
CDX1P47902 MIR876-201ENST00000401147 81 ntBASIC-0.29□□□□□ -2.46
CDX1P47902 AL670379.3-201ENST00000605040 251 ntBASIC-0.29□□□□□ -2.46
CDX1P47902 RNA5SP98-201ENST00000363158 137 ntBASIC-0.3□□□□□ -2.46
CDX1P47902 SNORA18.1-201ENST00000363418 128 ntBASIC-0.3□□□□□ -2.46
CDX1P47902 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms