Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 RNU6-1201P-201ENST00000384227 107 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 MIR643-201ENST00000385267 97 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 MIR548G-201ENST00000408442 89 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 RNU6-1265P-201ENST00000516342 103 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 RNU6-659P-201ENST00000516454 104 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 uc_338.28-201ENST00000612082 187 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 AL162726.3-218ENST00000636401 95 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 MIR3914-2-201ENST00000637339 95 ntBASIC0.09□□□□□ -2.4
BRCC3P46736 Y_RNA.173-201ENST00000363776 113 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 SNORD38.1-201ENST00000363863 68 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 Y_RNA.346-201ENST00000365385 112 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 MIR539-201ENST00000365690 78 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 RNU6-1062P-201ENST00000383908 107 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 RNU6-80P-201ENST00000384195 107 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 MIR501-201ENST00000390204 84 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 SNORD33.1-201ENST00000516213 88 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 RNU6-1018P-201ENST00000516577 106 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 Y_RNA.703-201ENST00000516846 111 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 Y_RNA.712-201ENST00000517011 92 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 MIR3613-201ENST00000579844 87 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
BRCC3P46736 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
BRCC3P46736 MIR548A1-201ENST00000385041 97 ntBASIC0.07□□□□□ -2.4
BRCC3P46736 RNA5SP484-201ENST00000458857 111 ntBASIC0.07□□□□□ -2.4
BRCC3P46736 AC007012.1-201ENST00000567192 175 ntBASIC0.07□□□□□ -2.4
BRCC3P46736 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
BRCC3P46736 RNU6-90P-201ENST00000606352 106 ntBASIC0.07□□□□□ -2.4
BRCC3P46736 AL442128.1-201ENST00000615151 90 ntBASIC0.07□□□□□ -2.4
BRCC3P46736 RNU6-746P-201ENST00000384112 109 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 SNORD38.2-201ENST00000384470 69 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 Y_RNA.507-201ENST00000384500 99 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 MIR577-201ENST00000385196 96 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 Y_RNA.649-201ENST00000459077 103 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 RNU7-13P-201ENST00000516413 62 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 NAMPTP3-201ENST00000569273 224 ntBASIC0.06□□□□□ -2.4
BRCC3P46736 Y_RNA.57-201ENST00000362806 113 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 RNA5SP257-201ENST00000363023 116 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 RNU6-704P-201ENST00000364162 103 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 RNU6-1163P-201ENST00000364516 107 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 RNU6-1254P-201ENST00000391266 104 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 HMGN2P22-201ENST00000427588 175 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 MIR4679-2-201ENST00000578358 77 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 MIR5190-201ENST00000581537 80 ntBASIC0.05□□□□□ -2.4
BRCC3P46736 SNORD50.2-201ENST00000365465 70 ntBASIC0.04□□□□□ -2.4
BRCC3P46736 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.04□□□□□ -2.4
BRCC3P46736 MIR3925-201ENST00000584674 77 ntBASIC0.04□□□□□ -2.4
BRCC3P46736 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 RNU6-957P-201ENST00000363652 99 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 MIR519E-201ENST00000385075 84 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 AC068339.1-201ENST00000526965 141 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 MIR5706-201ENST00000579841 80 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 MIR548AD-201ENST00000584780 82 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 TRDV1-202ENST00000621643 102 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 U6.100-201ENST00000636230 99 ntBASIC0.03□□□□□ -2.4
BRCC3P46736 Y_RNA.353-201ENST00000365440 108 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 Y_RNA.374-201ENST00000365606 101 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 RNU6-243P-201ENST00000391140 107 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 SNORD110-201ENST00000408189 75 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 MIR1912-201ENST00000410389 80 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 AC093423.1-201ENST00000440817 142 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.02□□□□□ -2.41
BRCC3P46736 RNU6-782P-201ENST00000516852 104 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 MIR4677-201ENST00000584153 80 ntBASIC0.02□□□□□ -2.41
BRCC3P46736 RNU6-161P-201ENST00000363051 106 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 RNU6-832P-201ENST00000363319 107 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 RNU1-141P-201ENST00000364623 158 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 Y_RNA.261-201ENST00000364631 102 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 U8.6-201ENST00000364939 135 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 Y_RNA.377-201ENST00000365644 108 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 MIR145-201ENST00000384967 88 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 AC006210.1-201ENST00000424882 111 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 AC109327.2-201ENST00000448339 378 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 snoU13.11-201ENST00000459219 104 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 RNU6-287P-201ENST00000516230 98 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 AC073869.9-201ENST00000641610 120 ntBASIC0.01□□□□□ -2.41
BRCC3P46736 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
BRCC3P46736 Y_RNA.309-201ENST00000365046 111 ntBASIC0□□□□□ -2.41
BRCC3P46736 SNORD116-14-201ENST00000383894 92 ntBASIC0□□□□□ -2.41
BRCC3P46736 SNORD116-17-201ENST00000383929 92 ntBASIC0□□□□□ -2.41
BRCC3P46736 SNORD116-15-201ENST00000384445 92 ntBASIC0□□□□□ -2.41
BRCC3P46736 SNORD116-19-201ENST00000384729 92 ntBASIC0□□□□□ -2.41
BRCC3P46736 MIR181B2-201ENST00000385004 89 ntBASIC0□□□□□ -2.41
BRCC3P46736 MIR2113-201ENST00000459007 91 ntBASIC0□□□□□ -2.41
BRCC3P46736 MIR4743-201ENST00000584576 69 ntBASIC0□□□□□ -2.41
BRCC3P46736 MIR617-201ENST00000385030 97 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 MIR548A3-201ENST00000385297 97 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 MIR4694-201ENST00000578534 80 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 RNU6-86P-201ENST00000606534 107 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 AC025521.1-201ENST00000621624 286 ntBASIC-0.01□□□□□ -2.41
BRCC3P46736 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.02□□□□□ -2.41
BRCC3P46736 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.02□□□□□ -2.41
BRCC3P46736 RNU6-509P-201ENST00000363519 107 ntBASIC-0.02□□□□□ -2.41
BRCC3P46736 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms