Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HOXC12P31275 RNU6-957P-201ENST00000363652 99 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 RNY1P1-201ENST00000364372 112 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 RNU6-524P-201ENST00000384270 107 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 RNU6-466P-201ENST00000391224 103 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 AL161932.1-201ENST00000437408 146 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 RNU7-85P-201ENST00000458851 63 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 SNORD4B-201ENST00000459083 72 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 RNU6-267P-201ENST00000516714 103 ntBASIC1.17□□□□□ -2.22
HOXC12P31275 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HOXC12P31275 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
HOXC12P31275 MIR494-201ENST00000349529 81 ntBASIC1.16□□□□□ -2.22
HOXC12P31275 Y_RNA.221-201ENST00000364248 96 ntBASIC1.16□□□□□ -2.22
HOXC12P31275 RNU6-65P-201ENST00000516332 98 ntBASIC1.16□□□□□ -2.22
HOXC12P31275 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.16□□□□□ -2.22
HOXC12P31275 PVT1_3.1-201ENST00000620853 95 ntBASIC1.16□□□□□ -2.22
HOXC12P31275 RNA5SP325-201ENST00000363756 130 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 Y_RNA.283-201ENST00000364798 112 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 MIR644A-201ENST00000385262 94 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 SNORD99-201ENST00000408612 74 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 Y_RNA.620-201ENST00000411009 88 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 AC244505.6-201ENST00000452829 130 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
HOXC12P31275 RNU6-219P-201ENST00000364728 107 ntBASIC1.14□□□□□ -2.23
HOXC12P31275 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
HOXC12P31275 AC011195.1-201ENST00000578177 177 ntBASIC1.14□□□□□ -2.23
HOXC12P31275 MIR3612-201ENST00000579753 87 ntBASIC1.14□□□□□ -2.23
HOXC12P31275 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXC12P31275 MIR598-201ENST00000384868 97 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 SNORA26.2-201ENST00000390922 122 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 RPS29P1-201ENST00000465274 159 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 RNU6-469P-201ENST00000516253 101 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 AC062037.1-201ENST00000605302 128 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 TRDV1-202ENST00000621643 102 ntBASIC1.13□□□□□ -2.23
HOXC12P31275 Y_RNA.36-201ENST00000362602 112 ntBASIC1.12□□□□□ -2.23
HOXC12P31275 RNU4-32P-201ENST00000363404 141 ntBASIC1.12□□□□□ -2.23
HOXC12P31275 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HOXC12P31275 RNU6-820P-201ENST00000384273 107 ntBASIC1.12□□□□□ -2.23
HOXC12P31275 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.12□□□□□ -2.23
HOXC12P31275 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.12□□□□□ -2.23
HOXC12P31275 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.12□□□□□ -2.23
HOXC12P31275 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
HOXC12P31275 RNU6-633P-201ENST00000362612 103 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 SNORD115-24-201ENST00000363528 82 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 RNU6-675P-201ENST00000384236 104 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 MIR1302-4-201ENST00000408701 150 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 RNY4P29-201ENST00000410801 97 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 AL606490.4-201ENST00000423117 127 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 AC004223.1-201ENST00000479840 271 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 RNA5SP61-201ENST00000516453 100 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 MIR4661-201ENST00000582720 75 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 MIR151B-201ENST00000584249 96 ntBASIC1.11□□□□□ -2.23
HOXC12P31275 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
HOXC12P31275 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
HOXC12P31275 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.1□□□□□ -2.23
HOXC12P31275 RNU6-75P-201ENST00000515944 104 ntBASIC1.1□□□□□ -2.23
HOXC12P31275 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HOXC12P31275 Y_RNA.73-201ENST00000362910 113 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 SNORD115-27-201ENST00000364430 82 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 AC244098.3-201ENST00000424803 96 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 RN7SKP12-201ENST00000516275 143 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 MIR3678-201ENST00000578455 94 ntBASIC1.09□□□□□ -2.23
HOXC12P31275 RNU6-509P-201ENST00000363519 107 ntBASIC1.08□□□□□ -2.24
HOXC12P31275 Y_RNA.388-201ENST00000383919 113 ntBASIC1.08□□□□□ -2.24
HOXC12P31275 MIR519C-201ENST00000385053 87 ntBASIC1.08□□□□□ -2.24
HOXC12P31275 Y_RNA.611-201ENST00000410682 108 ntBASIC1.08□□□□□ -2.24
HOXC12P31275 SNORA72.7-201ENST00000516349 94 ntBASIC1.08□□□□□ -2.24
HOXC12P31275 MIR1236-201ENST00000408340 102 ntBASIC1.07□□□□□ -2.24
HOXC12P31275 RNU6-135P-201ENST00000516769 101 ntBASIC1.07□□□□□ -2.24
HOXC12P31275 AL353765.1-201ENST00000605514 183 ntBASIC1.07□□□□□ -2.24
HOXC12P31275 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
HOXC12P31275 MIRLET7F1-201ENST00000362202 87 ntBASIC1.06□□□□□ -2.24
HOXC12P31275 RNU6-811P-201ENST00000384069 107 ntBASIC1.06□□□□□ -2.24
HOXC12P31275 AC022137.1-201ENST00000483735 151 ntBASIC1.06□□□□□ -2.24
HOXC12P31275 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
HOXC12P31275 MIR548BB-201ENST00000626714 66 ntBASIC1.06□□□□□ -2.24
HOXC12P31275 U6.100-201ENST00000636230 99 ntBASIC1.06□□□□□ -2.24
HOXC12P31275 MIR18A-201ENST00000362310 71 ntBASIC1.05□□□□□ -2.24
HOXC12P31275 RNU6-1229P-201ENST00000364295 107 ntBASIC1.05□□□□□ -2.24
HOXC12P31275 MIR548U-201ENST00000390728 81 ntBASIC1.05□□□□□ -2.24
HOXC12P31275 Y_RNA.596-201ENST00000410462 109 ntBASIC1.05□□□□□ -2.24
HOXC12P31275 RNA5SP222-201ENST00000411039 105 ntBASIC1.05□□□□□ -2.24
HOXC12P31275 RNU7-161P-201ENST00000517289 62 ntBASIC1.05□□□□□ -2.24
HOXC12P31275 RNA5SP403-201ENST00000363598 108 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 SNORD18A-201ENST00000363753 72 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 RNU6-132P-201ENST00000383863 107 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 SNORD28-201ENST00000384706 75 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 RNU7-104P-201ENST00000459398 79 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 RNU7-153P-201ENST00000516455 62 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 MIR4639-201ENST00000584938 69 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 AC244669.1-204ENST00000621564 178 ntBASIC1.04□□□□□ -2.24
HOXC12P31275 RNU6-664P-201ENST00000362381 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms