Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC097635.1-201ENST00000450678 155 ntBASIC0.86□□□□□ -2.27
HOXA11P31270 Y_RNA.648-201ENST00000459455 110 ntBASIC0.86□□□□□ -2.27
HOXA11P31270 RNU7-106P-201ENST00000459514 67 ntBASIC0.86□□□□□ -2.27
HOXA11P31270 AC026421.1-201ENST00000519101 163 ntBASIC0.86□□□□□ -2.27
HOXA11P31270 Y_RNA.174-201ENST00000363781 105 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 Y_RNA.190-201ENST00000363964 101 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 RNU6-675P-201ENST00000384236 104 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 Y_RNA.558-201ENST00000384685 113 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 SNORD105-201ENST00000386910 85 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 Y_RNA.697-201ENST00000516776 113 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 AC138907.6-201ENST00000568401 126 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 AC138869.1-201ENST00000568623 124 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 AC025627.3-201ENST00000582078 182 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
HOXA11P31270 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 MIR516A2-201ENST00000384888 90 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 MIR516A1-201ENST00000385033 90 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 AL161932.1-201ENST00000437408 146 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 AC002350.1-201ENST00000490759 375 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 RNU6-162P-201ENST00000516228 103 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 AC006254.2-201ENST00000603259 279 ntBASIC0.84□□□□□ -2.27
HOXA11P31270 RNU6-535P-201ENST00000384722 107 ntBASIC0.83□□□□□ -2.28
HOXA11P31270 MIR1302-4-201ENST00000408701 150 ntBASIC0.83□□□□□ -2.28
HOXA11P31270 MIR6515-201ENST00000619843 57 ntBASIC0.83□□□□□ -2.28
HOXA11P31270 MIR4679-1-201ENST00000637619 75 ntBASIC0.83□□□□□ -2.28
HOXA11P31270 RNA5SP245-201ENST00000364239 121 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 RNU6-219P-201ENST00000364728 107 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 MIR573-201ENST00000384964 99 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 MIR520H-201ENST00000385126 88 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 RNU6-243P-201ENST00000391140 107 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 RNU7-85P-201ENST00000458851 63 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
HOXA11P31270 Y_RNA.32-201ENST00000362589 110 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HOXA11P31270 SNORD116-22-201ENST00000384430 92 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 Y_RNA.620-201ENST00000411009 88 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 RNU7-195P-201ENST00000458793 62 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 SNORD4B-201ENST00000459083 72 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 RNU6-75P-201ENST00000515944 104 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 Y_RNA.809-201ENST00000516058 95 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 RNU6-1265P-201ENST00000516342 103 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 SNORA31.14-201ENST00000516728 116 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 RNU6-135P-201ENST00000516769 101 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 MTRNR2L2-201ENST00000604882 87 ntBASIC0.81□□□□□ -2.28
HOXA11P31270 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.81□□□□□ -2.28
HOXA11P31270 Y_RNA.593-201ENST00000410292 98 ntBASIC0.8□□□□□ -2.28
HOXA11P31270 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.8□□□□□ -2.28
HOXA11P31270 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
HOXA11P31270 Y_RNA.17-201ENST00000362433 111 ntBASIC0.79□□□□□ -2.28
HOXA11P31270 Y_RNA.283-201ENST00000364798 112 ntBASIC0.79□□□□□ -2.28
HOXA11P31270 MIR599-201ENST00000385069 95 ntBASIC0.79□□□□□ -2.28
HOXA11P31270 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
HOXA11P31270 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.79□□□□□ -2.28
HOXA11P31270 MIR4668-201ENST00000582284 70 ntBASIC0.79□□□□□ -2.28
HOXA11P31270 RNU6-633P-201ENST00000362612 103 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 RNA5SP403-201ENST00000363598 108 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 Y_RNA.540-201ENST00000384638 111 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 MIR450A2-201ENST00000385022 100 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 snoU13.11-201ENST00000459219 104 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 PVT1_3.1-201ENST00000620853 95 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
HOXA11P31270 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HOXA11P31270 SNORD73B-201ENST00000364394 72 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 RNU4-45P-201ENST00000365469 141 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 RNU6-820P-201ENST00000384273 107 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 Y_RNA.609-201ENST00000410669 89 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 AC244098.3-201ENST00000424803 96 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 RNU6-762P-201ENST00000517107 102 ntBASIC0.77□□□□□ -2.29
HOXA11P31270 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.77□□□□□ -2.29
HOXA11P31270 RNU6-1152P-201ENST00000384576 107 ntBASIC0.76□□□□□ -2.29
HOXA11P31270 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
HOXA11P31270 RNU6-466P-201ENST00000391224 103 ntBASIC0.76□□□□□ -2.29
HOXA11P31270 RNU6-519P-201ENST00000410590 108 ntBASIC0.76□□□□□ -2.29
HOXA11P31270 MIR4639-201ENST00000584938 69 ntBASIC0.76□□□□□ -2.29
HOXA11P31270 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
HOXA11P31270 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.76□□□□□ -2.29
HOXA11P31270 RNU6-509P-201ENST00000363519 107 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 RNU6-957P-201ENST00000363652 99 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 RNU6-1134P-201ENST00000365156 101 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 RNA5SP117-201ENST00000365294 118 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 RNU6-402P-201ENST00000410678 103 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.75□□□□□ -2.29
HOXA11P31270 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 TRDV1-202ENST00000621643 102 ntBASIC0.75□□□□□ -2.29
HOXA11P31270 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
HOXA11P31270 RNU6-524P-201ENST00000384270 107 ntBASIC0.74□□□□□ -2.29
HOXA11P31270 SNORD28-201ENST00000384706 75 ntBASIC0.74□□□□□ -2.29
HOXA11P31270 MIR598-201ENST00000384868 97 ntBASIC0.74□□□□□ -2.29
HOXA11P31270 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
HOXA11P31270 MIR18A-201ENST00000362310 71 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 SNORD18A-201ENST00000363753 72 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 RNY1P4-201ENST00000384595 115 ntBASIC0.73□□□□□ -2.29
HOXA11P31270 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms