Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SNORA31.14-201ENST00000516728 116 ntBASIC1.29□□□□□ -2.2
ITGA4P13612 MIR4536-1-201ENST00000583537 88 ntBASIC1.29□□□□□ -2.2
ITGA4P13612 MIR548BB-201ENST00000626714 66 ntBASIC1.29□□□□□ -2.2
ITGA4P13612 RNU6-573P-201ENST00000383938 106 ntBASIC1.28□□□□□ -2.2
ITGA4P13612 RNU6-75P-201ENST00000515944 104 ntBASIC1.28□□□□□ -2.2
ITGA4P13612 MIR5588-201ENST00000581890 63 ntBASIC1.28□□□□□ -2.2
ITGA4P13612 uc_338.16-201ENST00000621804 95 ntBASIC1.28□□□□□ -2.2
ITGA4P13612 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ITGA4P13612 RNU6-1335P-201ENST00000365426 107 ntBASIC1.27□□□□□ -2.21
ITGA4P13612 RNU6-524P-201ENST00000384270 107 ntBASIC1.27□□□□□ -2.21
ITGA4P13612 MIR519C-201ENST00000385053 87 ntBASIC1.27□□□□□ -2.21
ITGA4P13612 AL606490.4-201ENST00000423117 127 ntBASIC1.27□□□□□ -2.21
ITGA4P13612 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
ITGA4P13612 SNORD114-24-201ENST00000365029 72 ntBASIC1.26□□□□□ -2.21
ITGA4P13612 RNU6-979P-201ENST00000383896 107 ntBASIC1.26□□□□□ -2.21
ITGA4P13612 RNU6-242P-201ENST00000384359 107 ntBASIC1.26□□□□□ -2.21
ITGA4P13612 TRDV1-202ENST00000621643 102 ntBASIC1.26□□□□□ -2.21
ITGA4P13612 Y_RNA.174-201ENST00000363781 105 ntBASIC1.25□□□□□ -2.21
ITGA4P13612 AC244505.6-201ENST00000452829 130 ntBASIC1.25□□□□□ -2.21
ITGA4P13612 AC002350.1-201ENST00000490759 375 ntBASIC1.25□□□□□ -2.21
ITGA4P13612 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
ITGA4P13612 Y_RNA.224-201ENST00000364308 111 ntBASIC1.24□□□□□ -2.21
ITGA4P13612 RNU6-1276P-201ENST00000365372 104 ntBASIC1.24□□□□□ -2.21
ITGA4P13612 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
ITGA4P13612 AC087343.1-201ENST00000477341 475 ntBASIC1.24□□□□□ -2.21
ITGA4P13612 AC006160.2-201ENST00000637708 154 ntBASIC1.24□□□□□ -2.21
ITGA4P13612 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
ITGA4P13612 MIR96-201ENST00000362288 78 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 Y_RNA.221-201ENST00000364248 96 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 RNU6-811P-201ENST00000384069 107 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 MIR1236-201ENST00000408340 102 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 MIR4452-201ENST00000583004 71 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 MIR1245B-201ENST00000636115 69 ntBASIC1.23□□□□□ -2.21
ITGA4P13612 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 RNA5SP117-201ENST00000365294 118 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 RNU6-132P-201ENST00000383863 107 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 Y_RNA.426-201ENST00000384068 113 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 Y_RNA.508-201ENST00000384502 114 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 RNU7-153P-201ENST00000516455 62 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 U6.100-201ENST00000636230 99 ntBASIC1.22□□□□□ -2.21
ITGA4P13612 MIRLET7F1-201ENST00000362202 87 ntBASIC1.21□□□□□ -2.22
ITGA4P13612 SNORD114-22-201ENST00000365423 72 ntBASIC1.21□□□□□ -2.22
ITGA4P13612 MIR573-201ENST00000384964 99 ntBASIC1.21□□□□□ -2.22
ITGA4P13612 RNU7-171P-201ENST00000459581 62 ntBASIC1.21□□□□□ -2.22
ITGA4P13612 AC025627.3-201ENST00000582078 182 ntBASIC1.21□□□□□ -2.22
ITGA4P13612 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.21□□□□□ -2.22
ITGA4P13612 SNORD115-37-201ENST00000363768 82 ntBASIC1.2□□□□□ -2.22
ITGA4P13612 MIR644A-201ENST00000385262 94 ntBASIC1.2□□□□□ -2.22
ITGA4P13612 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
ITGA4P13612 RNA5SP292-201ENST00000390974 118 ntBASIC1.2□□□□□ -2.22
ITGA4P13612 RNU6-1265P-201ENST00000516342 103 ntBASIC1.2□□□□□ -2.22
ITGA4P13612 MIR3064-201ENST00000581130 66 ntBASIC1.2□□□□□ -2.22
ITGA4P13612 AC104996.3-201ENST00000590718 94 ntBASIC1.2□□□□□ -2.22
ITGA4P13612 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ITGA4P13612 SNORD115-24-201ENST00000363528 82 ntBASIC1.19□□□□□ -2.22
ITGA4P13612 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
ITGA4P13612 AC093729.1-201ENST00000513074 128 ntBASIC1.19□□□□□ -2.22
ITGA4P13612 Y_RNA.219-201ENST00000364232 113 ntBASIC1.18□□□□□ -2.22
ITGA4P13612 MIR548U-201ENST00000390728 81 ntBASIC1.18□□□□□ -2.22
ITGA4P13612 MIR3612-201ENST00000579753 87 ntBASIC1.18□□□□□ -2.22
ITGA4P13612 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
ITGA4P13612 MIR518E-201ENST00000385252 88 ntBASIC1.17□□□□□ -2.22
ITGA4P13612 SNORD99-201ENST00000408612 74 ntBASIC1.17□□□□□ -2.22
ITGA4P13612 Y_RNA.607-201ENST00000410597 98 ntBASIC1.17□□□□□ -2.22
ITGA4P13612 RNU6-469P-201ENST00000516253 101 ntBASIC1.17□□□□□ -2.22
ITGA4P13612 MIR4796-201ENST00000580742 81 ntBASIC1.17□□□□□ -2.22
ITGA4P13612 RNU1-93P-201ENST00000364704 169 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 SNORD101-201ENST00000384027 73 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 Y_RNA.491-201ENST00000384417 107 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ITGA4P13612 Y_RNA.596-201ENST00000410462 109 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 SNORA18.5-201ENST00000516616 101 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 RNU7-161P-201ENST00000517289 62 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
ITGA4P13612 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ITGA4P13612 RNU6-664P-201ENST00000362381 107 ntBASIC1.15□□□□□ -2.23
ITGA4P13612 RNU6-787P-201ENST00000384032 107 ntBASIC1.15□□□□□ -2.23
ITGA4P13612 Y_RNA.437-201ENST00000384113 113 ntBASIC1.15□□□□□ -2.23
ITGA4P13612 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.15□□□□□ -2.23
ITGA4P13612 MIR4696-201ENST00000581431 70 ntBASIC1.15□□□□□ -2.23
ITGA4P13612 MIR3202-2-201ENST00000635980 79 ntBASIC1.15□□□□□ -2.23
ITGA4P13612 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
ITGA4P13612 RNA5SP403-201ENST00000363598 108 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 Y_RNA.355-201ENST00000365462 98 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ITGA4P13612 RNU6-1124P-201ENST00000384169 107 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 RNU7-104P-201ENST00000459398 79 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 SNORA25.13-201ENST00000516395 103 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 RNU6-135P-201ENST00000516769 101 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 AC140658.3-201ENST00000567603 271 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 MIR4666B-201ENST00000578142 81 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 MTRNR2L2-201ENST00000604882 87 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
ITGA4P13612 RNU6-228P-201ENST00000362700 106 ntBASIC1.13□□□□□ -2.23
ITGA4P13612 Y_RNA.239-201ENST00000364444 113 ntBASIC1.13□□□□□ -2.23
ITGA4P13612 SNORD78.1-201ENST00000390866 65 ntBASIC1.13□□□□□ -2.23
ITGA4P13612 AC244098.3-201ENST00000424803 96 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 265.7 ms