Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNU6-977P-201ENST00000516411 103 ntBASIC1.45□□□□□ -2.18
SYPP08247 RNA5SP102-201ENST00000516865 106 ntBASIC1.45□□□□□ -2.18
SYPP08247 MIR4796-201ENST00000580742 81 ntBASIC1.45□□□□□ -2.18
SYPP08247 AC104996.3-201ENST00000590718 94 ntBASIC1.45□□□□□ -2.18
SYPP08247 AC008608.1-201ENST00000603910 127 ntBASIC1.45□□□□□ -2.18
SYPP08247 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SYPP08247 Y_RNA.244-201ENST00000364484 109 ntBASIC1.44□□□□□ -2.18
SYPP08247 RNU6-24P-201ENST00000384440 107 ntBASIC1.44□□□□□ -2.18
SYPP08247 RNU6-535P-201ENST00000384722 107 ntBASIC1.44□□□□□ -2.18
SYPP08247 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
SYPP08247 AC002429.1-201ENST00000437672 148 ntBASIC1.44□□□□□ -2.18
SYPP08247 AC138907.6-201ENST00000568401 126 ntBASIC1.44□□□□□ -2.18
SYPP08247 AC138869.1-201ENST00000568623 124 ntBASIC1.44□□□□□ -2.18
SYPP08247 MIR4712-201ENST00000583750 82 ntBASIC1.44□□□□□ -2.18
SYPP08247 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SYPP08247 MIR1-1-201ENST00000362147 71 ntBASIC1.43□□□□□ -2.18
SYPP08247 RNU6-624P-201ENST00000363411 107 ntBASIC1.43□□□□□ -2.18
SYPP08247 RNA5SP245-201ENST00000364239 121 ntBASIC1.43□□□□□ -2.18
SYPP08247 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
SYPP08247 MIR100-201ENST00000385259 80 ntBASIC1.43□□□□□ -2.18
SYPP08247 MIR1827-201ENST00000408549 66 ntBASIC1.43□□□□□ -2.18
SYPP08247 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.43□□□□□ -2.18
SYPP08247 AL606490.4-201ENST00000423117 127 ntBASIC1.43□□□□□ -2.18
SYPP08247 SNORA18.5-201ENST00000516616 101 ntBASIC1.43□□□□□ -2.18
SYPP08247 TRDV1-202ENST00000621643 102 ntBASIC1.43□□□□□ -2.18
SYPP08247 MIRLET7F1-201ENST00000362202 87 ntBASIC1.42□□□□□ -2.18
SYPP08247 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
SYPP08247 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
SYPP08247 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
SYPP08247 MIR548U-201ENST00000390728 81 ntBASIC1.42□□□□□ -2.18
SYPP08247 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
SYPP08247 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SYPP08247 Y_RNA.491-201ENST00000384417 107 ntBASIC1.41□□□□□ -2.18
SYPP08247 MIR599-201ENST00000385069 95 ntBASIC1.41□□□□□ -2.18
SYPP08247 RNU1-119P-201ENST00000391122 165 ntBASIC1.41□□□□□ -2.18
SYPP08247 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
SYPP08247 MIR520F-201ENST00000384824 87 ntBASIC1.4□□□□□ -2.19
SYPP08247 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SYPP08247 RNU6-129P-201ENST00000391022 107 ntBASIC1.4□□□□□ -2.19
SYPP08247 RNU6-315P-201ENST00000362666 107 ntBASIC1.39□□□□□ -2.19
SYPP08247 RNU6-478P-201ENST00000363904 110 ntBASIC1.39□□□□□ -2.19
SYPP08247 AL450471.1-201ENST00000447509 127 ntBASIC1.39□□□□□ -2.19
SYPP08247 AC244505.6-201ENST00000452829 130 ntBASIC1.39□□□□□ -2.19
SYPP08247 RMST_2.1-201ENST00000617263 136 ntBASIC1.39□□□□□ -2.19
SYPP08247 SNORD114-22-201ENST00000365423 72 ntBASIC1.38□□□□□ -2.19
SYPP08247 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
SYPP08247 RNU6-1265P-201ENST00000516342 103 ntBASIC1.38□□□□□ -2.19
SYPP08247 MTRNR2L2-201ENST00000604882 87 ntBASIC1.38□□□□□ -2.19
SYPP08247 U6.100-201ENST00000636230 99 ntBASIC1.38□□□□□ -2.19
SYPP08247 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYPP08247 SNORA63.2-201ENST00000362603 126 ntBASIC1.37□□□□□ -2.19
SYPP08247 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYPP08247 RNU6-557P-201ENST00000516842 110 ntBASIC1.37□□□□□ -2.19
SYPP08247 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
SYPP08247 Y_RNA.32-201ENST00000362589 110 ntBASIC1.36□□□□□ -2.19
SYPP08247 FGF7P7-201ENST00000514120 227 ntBASIC1.36□□□□□ -2.19
SYPP08247 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYPP08247 uc_338.16-201ENST00000621804 95 ntBASIC1.36□□□□□ -2.19
SYPP08247 Y_RNA.221-201ENST00000364248 96 ntBASIC1.35□□□□□ -2.19
SYPP08247 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
SYPP08247 SNORA31.14-201ENST00000516728 116 ntBASIC1.35□□□□□ -2.19
SYPP08247 MIR4696-201ENST00000581431 70 ntBASIC1.35□□□□□ -2.19
SYPP08247 RNU6-664P-201ENST00000362381 107 ntBASIC1.34□□□□□ -2.19
SYPP08247 SNORD101-201ENST00000384027 73 ntBASIC1.34□□□□□ -2.19
SYPP08247 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
SYPP08247 SNORD90-201ENST00000391145 111 ntBASIC1.34□□□□□ -2.19
SYPP08247 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
SYPP08247 Y_RNA.174-201ENST00000363781 105 ntBASIC1.33□□□□□ -2.2
SYPP08247 Y_RNA.239-201ENST00000364444 113 ntBASIC1.33□□□□□ -2.2
SYPP08247 MIR520H-201ENST00000385126 88 ntBASIC1.33□□□□□ -2.2
SYPP08247 Y_RNA.596-201ENST00000410462 109 ntBASIC1.33□□□□□ -2.2
SYPP08247 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
SYPP08247 Y_RNA.660-201ENST00000516002 120 ntBASIC1.33□□□□□ -2.2
SYPP08247 RNU6-1110P-201ENST00000516462 101 ntBASIC1.33□□□□□ -2.2
SYPP08247 MIRLET7A1-201ENST00000362295 80 ntBASIC1.32□□□□□ -2.2
SYPP08247 RNU6-161P-201ENST00000363051 106 ntBASIC1.32□□□□□ -2.2
SYPP08247 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.32□□□□□ -2.2
SYPP08247 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
SYPP08247 AL136317.1-201ENST00000612653 226 ntBASIC1.32□□□□□ -2.2
SYPP08247 RNU6-686P-201ENST00000364839 107 ntBASIC1.31□□□□□ -2.2
SYPP08247 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
SYPP08247 FABP5P4-201ENST00000437203 171 ntBASIC1.31□□□□□ -2.2
SYPP08247 U7.7-201ENST00000459276 60 ntBASIC1.31□□□□□ -2.2
SYPP08247 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SYPP08247 MIR4662A-201ENST00000637499 67 ntBASIC1.31□□□□□ -2.2
SYPP08247 RNU6-1051P-201ENST00000365471 102 ntBASIC1.3□□□□□ -2.2
SYPP08247 RNU6-1296P-201ENST00000383879 107 ntBASIC1.3□□□□□ -2.2
SYPP08247 MIR7-2-201ENST00000384970 110 ntBASIC1.3□□□□□ -2.2
SYPP08247 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
SYPP08247 RNU6-1108P-201ENST00000516308 104 ntBASIC1.3□□□□□ -2.2
SYPP08247 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SYPP08247 RNU6-1094P-201ENST00000362416 104 ntBASIC1.29□□□□□ -2.2
SYPP08247 SNORD105-201ENST00000386910 85 ntBASIC1.29□□□□□ -2.2
SYPP08247 SNORD77.2-201ENST00000391045 68 ntBASIC1.29□□□□□ -2.2
SYPP08247 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
SYPP08247 SNORD124-201ENST00000459577 104 ntBASIC1.29□□□□□ -2.2
SYPP08247 AC002350.1-201ENST00000490759 375 ntBASIC1.29□□□□□ -2.2
SYPP08247 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
SYPP08247 RNA5SP403-201ENST00000363598 108 ntBASIC1.28□□□□□ -2.2
SYPP08247 Y_RNA.207-201ENST00000364142 106 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms