Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SEPT14P2-201ENST00000453405 183 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 MTND2P14-201ENST00000482139 351 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 FO082796.1-201ENST00000523795 183 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 NBR2-204ENST00000587322 63 ntBASIC-1.64□□□□□ -2.67
SPTA1P02549 RNU6-978P-201ENST00000364371 103 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 MIR521-2-201ENST00000384818 87 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 RNU6-696P-201ENST00000390834 107 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 RNU6-780P-201ENST00000391030 104 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.65□□□□□ -2.67
SPTA1P02549 AL021921.1-201ENST00000442774 93 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 AC009161.1-201ENST00000417306 376 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 MIR5701-3-201ENST00000578890 82 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 MIR5688-201ENST00000580619 83 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 MIR5701-1-201ENST00000585138 82 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 MIR5701-2-201ENST00000615634 82 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 FTX_4.1-201ENST00000616291 147 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 AC025521.1-201ENST00000621624 286 ntBASIC-1.65□□□□□ -2.67
SPTA1P02549 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 RNU6-593P-201ENST00000364716 112 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 MIR514A2-201ENST00000385131 88 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 MIR514A3-201ENST00000385132 88 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 RNU6-62P-201ENST00000516526 102 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 RNU6-521P-201ENST00000516663 105 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.66□□□□□ -2.67
SPTA1P02549 SNORD38.1-201ENST00000363863 68 ntBASIC-1.66□□□□□ -2.68
SPTA1P02549 RNU6-151P-201ENST00000364158 107 ntBASIC-1.66□□□□□ -2.68
SPTA1P02549 RNU6-841P-201ENST00000383872 107 ntBASIC-1.66□□□□□ -2.68
SPTA1P02549 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.66□□□□□ -2.68
SPTA1P02549 MIR616-201ENST00000385293 97 ntBASIC-1.66□□□□□ -2.68
SPTA1P02549 RNU6-232P-201ENST00000517144 64 ntBASIC-1.66□□□□□ -2.68
SPTA1P02549 RNU6-458P-201ENST00000384179 107 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 AC082651.2-201ENST00000496833 166 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 RNU6-561P-201ENST00000516222 102 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 MIR548AG1-201ENST00000579932 66 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 U6.58-201ENST00000613107 107 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 MIR6509-201ENST00000614603 85 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 AC124864.2-201ENST00000624736 186 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 AL512310.12-203ENST00000640543 90 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 AC096644.2-201ENST00000429278 159 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.67□□□□□ -2.68
SPTA1P02549 snoU13.17-201ENST00000458802 104 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 SEPT14P8-201ENST00000508026 178 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 SNORD58B-201ENST00000607313 66 ntBASIC-1.67□□□□□ -2.68
SPTA1P02549 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-510P-201ENST00000391239 108 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.68□□□□□ -2.68
SPTA1P02549 AC021753.1-201ENST00000635724 168 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-651P-201ENST00000411040 105 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-976P-201ENST00000516086 111 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 SNORA20.3-201ENST00000516880 132 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 AC018645.2-201ENST00000609151 472 ntBASIC-1.68□□□□□ -2.68
SPTA1P02549 UBE2WP1-201ENST00000362030 340 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 RNU6-832P-201ENST00000363319 107 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 MT-TW-201ENST00000387382 68 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 RPL35AP4-201ENST00000412007 102 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 C8orf59P2-201ENST00000603441 271 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 AC103591.3-201ENST00000608684 209 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 RNU6-309P-201ENST00000364573 106 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 MIR548I1-201ENST00000408810 149 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 RBMX2P4-201ENST00000441256 376 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 AL513043.2-201ENST00000573941 143 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 AC006254.2-201ENST00000603259 279 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 AC005520.4-201ENST00000604337 90 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.69□□□□□ -2.68
SPTA1P02549 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 RNU6-103P-201ENST00000363686 107 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.7□□□□□ -2.68
SPTA1P02549 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.7□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms