Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 RNU6-682P-201ENST00000363843 106 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 RNA5SP169-201ENST00000517268 117 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 TRDV1-202ENST00000621643 102 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 MIR6759-201ENST00000638110 65 ntBASIC-0.43□□□□□ -2.48
HLA-DQA1P01909 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 RNU6-243P-201ENST00000391140 107 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 MIR1263-201ENST00000408324 86 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 SPINT5P-201ENST00000448174 155 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 AC074198.2-201ENST00000508153 258 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 IGLVI-20-201ENST00000519296 130 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 U6.100-201ENST00000636230 99 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 AL512310.12-203ENST00000640543 90 ntBASIC-0.44□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.45□□□□□ -2.48
HLA-DQA1P01909 RNU6-463P-201ENST00000384340 107 ntBASIC-0.45□□□□□ -2.48
HLA-DQA1P01909 MT-TY-201ENST00000387409 66 ntBASIC-0.45□□□□□ -2.48
HLA-DQA1P01909 MIR759-201ENST00000390224 91 ntBASIC-0.45□□□□□ -2.48
HLA-DQA1P01909 RNU7-120P-201ENST00000459334 63 ntBASIC-0.45□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 RNU6-957P-201ENST00000363652 99 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 RNU6-154P-201ENST00000384306 106 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 MIR9-2-201ENST00000384838 87 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 AC114755.3-201ENST00000481111 251 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 SNORA81.3-201ENST00000517283 198 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 MIR4802-201ENST00000581881 80 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 MIR4436A-201ENST00000585278 85 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 AC145423.2-201ENST00000610631 239 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.46□□□□□ -2.48
HLA-DQA1P01909 SNORD114-28-201ENST00000363610 72 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 SNORD114-29-201ENST00000364819 70 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 SNORA49-201ENST00000386157 136 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 MIR548G-201ENST00000408442 89 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 AL353813.1-201ENST00000440700 253 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 RNU6-138P-201ENST00000515952 107 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 MIR4263-201ENST00000584745 83 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 RNU6-90P-201ENST00000606352 106 ntBASIC-0.47□□□□□ -2.48
HLA-DQA1P01909 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNU6-363P-201ENST00000362895 105 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNA5SP98-201ENST00000363158 137 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNU6-379P-201ENST00000363813 104 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNU6-200P-201ENST00000364743 107 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNU6-455P-201ENST00000384681 107 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 MIR548D2-201ENST00000384955 97 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 MIR652-201ENST00000385278 98 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNA5SP136-201ENST00000410906 107 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 RNU6-284P-201ENST00000411105 106 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 MIR4432-201ENST00000581823 84 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 MIR4645-201ENST00000583158 77 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.48□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 SNORD38.1-201ENST00000363863 68 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 RNU6-647P-201ENST00000364243 107 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 SNORD56B-201ENST00000384713 71 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 MIR513C-201ENST00000401352 84 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 RNU6-781P-201ENST00000516377 101 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 RNU6-388P-201ENST00000517012 105 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 RNU6-389P-201ENST00000517048 105 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 AP001328.1-201ENST00000528550 176 ntBASIC-0.49□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 AC097510.1-201ENST00000510945 133 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 MIR4280-201ENST00000582178 76 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 AP001340.1-201ENST00000624405 217 ntBASIC-0.5□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 SNORD116-18-201ENST00000383961 92 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 RNU6-394P-201ENST00000410735 107 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 AL158147.1-201ENST00000443970 75 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 MIR5589-201ENST00000579442 60 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 AC004792.1-201ENST00000614523 137 ntBASIC-0.51□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.52□□□□□ -2.49
HLA-DQA1P01909 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.52□□□□□ -2.49
HLA-DQA1P01909 RNU6-409P-201ENST00000384114 104 ntBASIC-0.52□□□□□ -2.49
HLA-DQA1P01909 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.52□□□□□ -2.49
HLA-DQA1P01909 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 274.8 ms