Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 MIR3925-201ENST00000584674 77 ntBASIC-0.08□□□□□ -2.42
PGK1P00558 RNU6-235P-201ENST00000362644 107 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 RNA5SP98-201ENST00000363158 137 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 SNORA7.5-201ENST00000410672 110 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 AC006210.1-201ENST00000424882 111 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 MTND4LP9-201ENST00000427694 174 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 RNU7-200P-201ENST00000516105 62 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 IGLVI-20-201ENST00000519296 130 ntBASIC-0.09□□□□□ -2.42
PGK1P00558 SNORD114-31-201ENST00000363219 75 ntBASIC-0.1□□□□□ -2.43
PGK1P00558 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.1□□□□□ -2.43
PGK1P00558 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
PGK1P00558 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.1□□□□□ -2.43
PGK1P00558 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
PGK1P00558 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.1□□□□□ -2.43
PGK1P00558 AC141557.1-201ENST00000540982 400 ntBASIC-0.1□□□□□ -2.43
PGK1P00558 RNU6-363P-201ENST00000362895 105 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 MIR106A-201ENST00000384870 81 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 SNORD110-201ENST00000408189 75 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.11□□□□□ -2.43
PGK1P00558 RNU6-509P-201ENST00000363519 107 ntBASIC-0.12□□□□□ -2.43
PGK1P00558 SNORD38.2-201ENST00000384470 69 ntBASIC-0.12□□□□□ -2.43
PGK1P00558 RNU6-772P-201ENST00000516042 105 ntBASIC-0.12□□□□□ -2.43
PGK1P00558 RNU6-255P-201ENST00000516957 105 ntBASIC-0.12□□□□□ -2.43
PGK1P00558 U7.6-201ENST00000610841 64 ntBASIC-0.12□□□□□ -2.43
PGK1P00558 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 MIR519E-201ENST00000385075 84 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 AC093423.1-201ENST00000440817 142 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 AC025166.1-201ENST00000612411 163 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 MTND5P18-201ENST00000445624 1801 ntBASIC-0.13□□□□□ -2.43
PGK1P00558 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 SNORD36A-201ENST00000362874 73 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 SNORD38.1-201ENST00000363863 68 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNU1-141P-201ENST00000364623 158 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 MIR759-201ENST00000390224 91 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 MIR876-201ENST00000401147 81 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 MIR892B-201ENST00000401279 77 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 MIR548G-201ENST00000408442 89 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNU6-257P-201ENST00000410238 98 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 AL161932.1-201ENST00000437408 146 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNU7-165P-201ENST00000458864 60 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNU7-159P-201ENST00000459284 62 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 SNORA25.13-201ENST00000516395 103 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNU6-794P-201ENST00000517261 64 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 TRDV1-202ENST00000621643 102 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.14□□□□□ -2.43
PGK1P00558 U6.100-201ENST00000636230 99 ntBASIC-0.14□□□□□ -2.43
PGK1P00558 RNU6-652P-201ENST00000365488 107 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 Z95118.1-201ENST00000421372 247 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 MIR2113-201ENST00000459007 91 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 AL035470.1-201ENST00000622571 220 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 AL512310.12-203ENST00000640543 90 ntBASIC-0.15□□□□□ -2.43
PGK1P00558 SNORD115-44-201ENST00000365391 82 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 RNU6-409P-201ENST00000384114 104 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 SNORA51.5-201ENST00000384126 131 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 MIR617-201ENST00000385030 97 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 SNORA75.1-201ENST00000391130 148 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 SPINT5P-201ENST00000448174 155 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 RNU7-74P-201ENST00000459104 62 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 RNU6-346P-201ENST00000516288 111 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 RNU6-180P-201ENST00000516697 61 ntBASIC-0.16□□□□□ -2.44
PGK1P00558 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.17□□□□□ -2.44
PGK1P00558 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.17□□□□□ -2.44
PGK1P00558 RNY1P5-201ENST00000383890 115 ntBASIC-0.17□□□□□ -2.44
PGK1P00558 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
PGK1P00558 AL162726.3-218ENST00000636401 95 ntBASIC-0.17□□□□□ -2.44
PGK1P00558 RNY4P6-201ENST00000363667 96 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 SNORA40-201ENST00000388090 126 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 RNU6-816P-201ENST00000390914 107 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 RNU7-107P-201ENST00000459121 61 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.18□□□□□ -2.44
PGK1P00558 RNU6-758P-201ENST00000516292 89 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.18□□□□□ -2.44
PGK1P00558 MIR4473-201ENST00000583731 91 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 AL670379.3-201ENST00000605040 251 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 AL442128.1-201ENST00000615151 90 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 MIR6514-201ENST00000622549 70 ntBASIC-0.18□□□□□ -2.44
PGK1P00558 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.19□□□□□ -2.44
PGK1P00558 RNU6-957P-201ENST00000363652 99 ntBASIC-0.19□□□□□ -2.44
PGK1P00558 RNU6-243P-201ENST00000391140 107 ntBASIC-0.19□□□□□ -2.44
PGK1P00558 RNU6-287P-201ENST00000516230 98 ntBASIC-0.19□□□□□ -2.44
PGK1P00558 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms