Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.27□□□□□ -2.05
ALDH1A1P00352 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
ALDH1A1P00352 Y_RNA.236-201ENST00000364427 111 ntBASIC2.26□□□□□ -2.05
ALDH1A1P00352 MIR489-201ENST00000384923 84 ntBASIC2.26□□□□□ -2.05
ALDH1A1P00352 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.26□□□□□ -2.05
ALDH1A1P00352 AL645939.4-201ENST00000604495 135 ntBASIC2.26□□□□□ -2.05
ALDH1A1P00352 RNA5SP276-201ENST00000362580 94 ntBASIC2.25□□□□□ -2.05
ALDH1A1P00352 snoU13.18-201ENST00000459483 104 ntBASIC2.25□□□□□ -2.05
ALDH1A1P00352 AL078603.1-201ENST00000603824 313 ntBASIC2.25□□□□□ -2.05
ALDH1A1P00352 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
ALDH1A1P00352 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.25□□□□□ -2.05
ALDH1A1P00352 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALDH1A1P00352 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
ALDH1A1P00352 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ALDH1A1P00352 RNU6-934P-201ENST00000365154 107 ntBASIC2.24□□□□□ -2.05
ALDH1A1P00352 AC244505.6-201ENST00000452829 130 ntBASIC2.24□□□□□ -2.05
ALDH1A1P00352 MIR3920-201ENST00000581751 86 ntBASIC2.24□□□□□ -2.05
ALDH1A1P00352 AC092634.7-201ENST00000621022 103 ntBASIC2.24□□□□□ -2.05
ALDH1A1P00352 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.24□□□□□ -2.05
ALDH1A1P00352 SNORD75.2-201ENST00000408784 58 ntBASIC2.23□□□□□ -2.05
ALDH1A1P00352 RNU4-62P-201ENST00000410125 130 ntBASIC2.23□□□□□ -2.05
ALDH1A1P00352 AL691482.2-201ENST00000457453 84 ntBASIC2.23□□□□□ -2.05
ALDH1A1P00352 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.23□□□□□ -2.05
ALDH1A1P00352 AL359851.1-201ENST00000569460 4997 ntBASIC2.23□□□□□ -2.05
ALDH1A1P00352 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ALDH1A1P00352 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ALDH1A1P00352 MIRLET7G-201ENST00000362280 84 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 SNORD115-44-201ENST00000365391 82 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 Y_RNA.375-201ENST00000365625 101 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 RNU6-535P-201ENST00000384722 107 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ALDH1A1P00352 RNU7-24P-201ENST00000458867 62 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 RNU6-542P-201ENST00000516405 103 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 AC084768.2-201ENST00000622736 221 ntBASIC2.22□□□□□ -2.05
ALDH1A1P00352 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ALDH1A1P00352 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
ALDH1A1P00352 SNORD113.3-201ENST00000364630 78 ntBASIC2.21□□□□□ -2.06
ALDH1A1P00352 MTND4LP1-201ENST00000446263 157 ntBASIC2.21□□□□□ -2.06
ALDH1A1P00352 MIR4771-2-201ENST00000577758 74 ntBASIC2.21□□□□□ -2.06
ALDH1A1P00352 MIR4771-1-201ENST00000582617 74 ntBASIC2.21□□□□□ -2.06
ALDH1A1P00352 AC008608.1-201ENST00000603910 127 ntBASIC2.21□□□□□ -2.06
ALDH1A1P00352 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALDH1A1P00352 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALDH1A1P00352 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ALDH1A1P00352 RNU6-668P-201ENST00000364180 107 ntBASIC2.2□□□□□ -2.06
ALDH1A1P00352 RNU6-1039P-201ENST00000383931 107 ntBASIC2.2□□□□□ -2.06
ALDH1A1P00352 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
ALDH1A1P00352 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
ALDH1A1P00352 MIR8074-201ENST00000615081 81 ntBASIC2.2□□□□□ -2.06
ALDH1A1P00352 MIR302D-201ENST00000362275 68 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 RNU6-1079P-201ENST00000362861 110 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 RNU6-495P-201ENST00000362995 107 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.19□□□□□ -2.06
ALDH1A1P00352 AC036111.3-201ENST00000526389 112 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 MIR3664-201ENST00000579074 99 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 MIR4255-201ENST00000579351 72 ntBASIC2.19□□□□□ -2.06
ALDH1A1P00352 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ALDH1A1P00352 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ALDH1A1P00352 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
ALDH1A1P00352 RNU6-165P-201ENST00000517170 99 ntBASIC2.18□□□□□ -2.06
ALDH1A1P00352 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
ALDH1A1P00352 AC073869.9-201ENST00000641610 120 ntBASIC2.18□□□□□ -2.06
ALDH1A1P00352 SNORA25.5-201ENST00000363782 126 ntBASIC2.17□□□□□ -2.06
ALDH1A1P00352 MIR548AG2-201ENST00000581228 64 ntBASIC2.17□□□□□ -2.06
ALDH1A1P00352 AL773524.1-201ENST00000614065 229 ntBASIC2.17□□□□□ -2.06
ALDH1A1P00352 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
ALDH1A1P00352 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
ALDH1A1P00352 AC003989.2-201ENST00000440224 169 ntBASIC2.16□□□□□ -2.06
ALDH1A1P00352 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
ALDH1A1P00352 MIR466-201ENST00000580653 84 ntBASIC2.16□□□□□ -2.06
ALDH1A1P00352 MIR4676-201ENST00000583078 72 ntBASIC2.16□□□□□ -2.06
ALDH1A1P00352 RNU6-1126P-201ENST00000384002 107 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 RPS26P5-201ENST00000418544 335 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 NAMPTP3-201ENST00000569273 224 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 MIR5002-201ENST00000584713 97 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 BX248123.2-201ENST00000606318 124 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 MIR502-201ENST00000606349 86 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 MIR6509-201ENST00000614603 85 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 MIR8063-201ENST00000621930 81 ntBASIC2.15□□□□□ -2.07
ALDH1A1P00352 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ALDH1A1P00352 RNU6-446P-201ENST00000362827 106 ntBASIC2.14□□□□□ -2.07
ALDH1A1P00352 RNU6-940P-201ENST00000363433 104 ntBASIC2.14□□□□□ -2.07
ALDH1A1P00352 Y_RNA.224-201ENST00000364308 111 ntBASIC2.14□□□□□ -2.07
ALDH1A1P00352 RNA5SP192-201ENST00000364404 120 ntBASIC2.14□□□□□ -2.07
ALDH1A1P00352 RNU7-13P-201ENST00000516413 62 ntBASIC2.14□□□□□ -2.07
ALDH1A1P00352 Y_RNA.330-201ENST00000365230 109 ntBASIC2.13□□□□□ -2.07
ALDH1A1P00352 SCARNA21.1-201ENST00000515996 128 ntBASIC2.13□□□□□ -2.07
ALDH1A1P00352 RNU7-40P-201ENST00000516397 64 ntBASIC2.13□□□□□ -2.07
ALDH1A1P00352 MIR4299-201ENST00000577899 72 ntBASIC2.13□□□□□ -2.07
ALDH1A1P00352 MIR4303-201ENST00000581299 66 ntBASIC2.13□□□□□ -2.07
ALDH1A1P00352 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
ALDH1A1P00352 RNA5SP403-201ENST00000363598 108 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 SNORD1A-201ENST00000364968 72 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 RNU6-364P-201ENST00000384387 107 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 MIR203A-201ENST00000384836 110 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 MIR216B-201ENST00000390186 82 ntBASIC2.12□□□□□ -2.07
ALDH1A1P00352 MIR8081-201ENST00000611533 95 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms