Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR520H-201ENST00000385126 88 ntBASIC1.08□□□□□ -2.24
CDKL5O76039 Y_RNA.809-201ENST00000516058 95 ntBASIC1.08□□□□□ -2.24
CDKL5O76039 MIR548BB-201ENST00000626714 66 ntBASIC1.08□□□□□ -2.24
CDKL5O76039 Y_RNA.32-201ENST00000362589 110 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 RNU6-1260P-201ENST00000362944 107 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 Y_RNA.283-201ENST00000364798 112 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 RNU6-979P-201ENST00000383896 107 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 Y_RNA.611-201ENST00000410682 108 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 AL606490.4-201ENST00000423117 127 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 AC097635.1-201ENST00000450678 155 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 RNU6-75P-201ENST00000515944 104 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 RNU6-1110P-201ENST00000516462 101 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 MIR5588-201ENST00000581890 63 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
CDKL5O76039 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 RNU4-32P-201ENST00000363404 141 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 RNU6-1335P-201ENST00000365426 107 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 MIR599-201ENST00000385069 95 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 RNU6-466P-201ENST00000391224 103 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
CDKL5O76039 SNORA31.14-201ENST00000516728 116 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 AC138907.6-201ENST00000568401 126 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 AC138869.1-201ENST00000568623 124 ntBASIC1.06□□□□□ -2.24
CDKL5O76039 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.06□□□□□ -2.24
CDKL5O76039 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
CDKL5O76039 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
CDKL5O76039 SNORD114-22-201ENST00000365423 72 ntBASIC1.05□□□□□ -2.24
CDKL5O76039 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
CDKL5O76039 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
CDKL5O76039 uc_338.16-201ENST00000621804 95 ntBASIC1.05□□□□□ -2.24
CDKL5O76039 MIR1245B-201ENST00000636115 69 ntBASIC1.05□□□□□ -2.24
CDKL5O76039 RNU6-524P-201ENST00000384270 107 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 MIR519C-201ENST00000385053 87 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 SNORD105-201ENST00000386910 85 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 MIR4536-1-201ENST00000583537 88 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 TRDV1-202ENST00000621643 102 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 AC006160.2-201ENST00000637708 154 ntBASIC1.04□□□□□ -2.24
CDKL5O76039 RNU6-1276P-201ENST00000365372 104 ntBASIC1.03□□□□□ -2.24
CDKL5O76039 AC244505.6-201ENST00000452829 130 ntBASIC1.03□□□□□ -2.24
CDKL5O76039 RNU6-65P-201ENST00000516332 98 ntBASIC1.03□□□□□ -2.24
CDKL5O76039 RNU7-153P-201ENST00000516455 62 ntBASIC1.03□□□□□ -2.24
CDKL5O76039 AL136317.1-201ENST00000612653 226 ntBASIC1.03□□□□□ -2.24
CDKL5O76039 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDKL5O76039 RNU6-132P-201ENST00000383863 107 ntBASIC1.02□□□□□ -2.25
CDKL5O76039 RNU6-242P-201ENST00000384359 107 ntBASIC1.02□□□□□ -2.25
CDKL5O76039 RNA5SP292-201ENST00000390974 118 ntBASIC1.02□□□□□ -2.25
CDKL5O76039 AC002350.1-201ENST00000490759 375 ntBASIC1.02□□□□□ -2.25
CDKL5O76039 MIRLET7F1-201ENST00000362202 87 ntBASIC1.01□□□□□ -2.25
CDKL5O76039 Y_RNA.221-201ENST00000364248 96 ntBASIC1.01□□□□□ -2.25
CDKL5O76039 RNU1-93P-201ENST00000364704 169 ntBASIC1.01□□□□□ -2.25
CDKL5O76039 MIR518E-201ENST00000385252 88 ntBASIC1.01□□□□□ -2.25
CDKL5O76039 RNU7-171P-201ENST00000459581 62 ntBASIC1.01□□□□□ -2.25
CDKL5O76039 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
CDKL5O76039 U6.100-201ENST00000636230 99 ntBASIC1.01□□□□□ -2.25
CDKL5O76039 Y_RNA.174-201ENST00000363781 105 ntBASIC1□□□□□ -2.25
CDKL5O76039 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
CDKL5O76039 RNU6-811P-201ENST00000384069 107 ntBASIC1□□□□□ -2.25
CDKL5O76039 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
CDKL5O76039 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1□□□□□ -2.25
CDKL5O76039 MIR1236-201ENST00000408340 102 ntBASIC1□□□□□ -2.25
CDKL5O76039 RNU6-1265P-201ENST00000516342 103 ntBASIC1□□□□□ -2.25
CDKL5O76039 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
CDKL5O76039 MIR3064-201ENST00000581130 66 ntBASIC1□□□□□ -2.25
CDKL5O76039 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
CDKL5O76039 Y_RNA.355-201ENST00000365462 98 ntBASIC0.99□□□□□ -2.25
CDKL5O76039 RNU6-787P-201ENST00000384032 107 ntBASIC0.99□□□□□ -2.25
CDKL5O76039 Y_RNA.426-201ENST00000384068 113 ntBASIC0.99□□□□□ -2.25
CDKL5O76039 Y_RNA.219-201ENST00000364232 113 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 MIR644A-201ENST00000385262 94 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 AC093729.1-201ENST00000513074 128 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 AC104996.3-201ENST00000590718 94 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 AL078603.1-201ENST00000603824 313 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
CDKL5O76039 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
CDKL5O76039 RNU6-228P-201ENST00000362700 106 ntBASIC0.97□□□□□ -2.25
CDKL5O76039 Y_RNA.118-201ENST00000363300 101 ntBASIC0.97□□□□□ -2.25
CDKL5O76039 SNORD115-24-201ENST00000363528 82 ntBASIC0.97□□□□□ -2.25
CDKL5O76039 RNA5SP117-201ENST00000365294 118 ntBASIC0.97□□□□□ -2.25
CDKL5O76039 MIR520E-201ENST00000384867 87 ntBASIC0.97□□□□□ -2.25
CDKL5O76039 Y_RNA.607-201ENST00000410597 98 ntBASIC0.97□□□□□ -2.25
CDKL5O76039 SNORD115-37-201ENST00000363768 82 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 Y_RNA.437-201ENST00000384113 113 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 RNU6-1124P-201ENST00000384169 107 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 SNORD78.1-201ENST00000390866 65 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 SNORA18.5-201ENST00000516616 101 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 RNU7-161P-201ENST00000517289 62 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 AC140658.3-201ENST00000567603 271 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 MIR4666B-201ENST00000578142 81 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 MIR3612-201ENST00000579753 87 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 MIR4796-201ENST00000580742 81 ntBASIC0.96□□□□□ -2.26
CDKL5O76039 RNU6-664P-201ENST00000362381 107 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms