Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MTND3P2-201ENST00000438452 342 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 RNU6-470P-201ENST00000515954 104 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 MIR3118-1-201ENST00000581787 76 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 AC009779.6-201ENST00000603972 165 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 AC006927.2-201ENST00000639256 389 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 RNU6-157P-201ENST00000383957 107 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 RNU7-141P-201ENST00000459304 62 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 MTCO3P23-201ENST00000561363 289 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 AC005357.1-201ENST00000588399 301 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 MIR548G-201ENST00000408442 89 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 RNU6-715P-201ENST00000365204 103 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 SNORD113-2-201ENST00000391082 72 ntBASIC-1.32□□□□□ -2.62
USH2AO75445 RNU6-172P-201ENST00000411000 93 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU2-55P-201ENST00000411146 174 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.33□□□□□ -2.62
USH2AO75445 RNU7-115P-201ENST00000516433 55 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU2-31P-201ENST00000516954 155 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AC092794.1-201ENST00000612734 582 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AC064836.2-201ENST00000609491 462 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU2-4P-201ENST00000606190 192 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AC002553.4-201ENST00000616896 331 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU5F-1-201ENST00000362507 117 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU6-681P-201ENST00000364012 104 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU6-620P-201ENST00000384017 96 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 MIR548U-201ENST00000390728 81 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 MTND4LP7-201ENST00000431728 294 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU6-65P-201ENST00000516332 98 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AC090617.9-201ENST00000623751 147 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 SNORD115-32-201ENST00000364079 82 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AL160004.2-201ENST00000432935 350 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 AC092794.2-201ENST00000620933 563 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 U6.106-201ENST00000636360 105 ntBASIC-1.33□□□□□ -2.62
USH2AO75445 RNU7-174P-201ENST00000516248 59 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 RNU4-69P-201ENST00000410677 143 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 MTND2P20-201ENST00000440805 661 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 AL691482.2-201ENST00000457453 84 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 RNU2-35P-201ENST00000516446 142 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 AC073869.6-201ENST00000640656 341 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 RNU2-42P-201ENST00000410697 113 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 SNORD113-8-201ENST00000363497 74 ntBASIC-1.34□□□□□ -2.62
USH2AO75445 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.34□□□□□ -2.62
USH2AO75445 RNU6-281P-201ENST00000384212 103 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 RNU7-175P-201ENST00000515915 61 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 RNU6-434P-201ENST00000384376 107 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 RNU6-763P-201ENST00000390865 106 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 AF228730.3-201ENST00000436691 102 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 AL451105.1-201ENST00000450005 189 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 AC100814.1-201ENST00000606963 623 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 RNU6-144P-201ENST00000383951 107 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 SNORA72.4-201ENST00000384174 132 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 MTATP6P29-201ENST00000415057 132 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 SNORA40.9-201ENST00000515895 93 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 RNU2-69P-201ENST00000516061 100 ntBASIC-1.35□□□□□ -2.63
USH2AO75445 SNORA41B-201ENST00000384785 128 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 AC099654.14-201ENST00000638599 341 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 RNU6-957P-201ENST00000363652 99 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 MTCO2P19-201ENST00000427513 598 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 MTND3P7-201ENST00000474435 343 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 MIR548I1-201ENST00000408810 149 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 AC090971.5-201ENST00000621102 293 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 AP001506.1-201ENST00000615444 211 ntBASIC-1.36□□□□□ -2.63
USH2AO75445 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 SCARNA15-202ENST00000516881 127 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 MIR3912-201ENST00000577566 105 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 RNU6-334P-201ENST00000517072 102 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.37□□□□□ -2.63
USH2AO75445 AL133173.2-201ENST00000614270 90 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 AC024614.3-201ENST00000637860 256 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 SNORD65C-201ENST00000390962 71 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.37□□□□□ -2.63
USH2AO75445 AC139792.2-201ENST00000624218 587 ntBASIC-1.37□□□□□ -2.63
USH2AO75445 MTND1P12-201ENST00000455231 147 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 RNU6-570P-201ENST00000517051 105 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 MIR3064-201ENST00000581130 66 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 AC069545.1-201ENST00000605671 358 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 AL512310.12-203ENST00000640543 90 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 MTND3P9-201ENST00000429526 346 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 MTND4LP1-201ENST00000446263 157 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 SNORD4B-201ENST00000459083 72 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.38□□□□□ -2.63
USH2AO75445 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 SNORA40.2-201ENST00000390847 128 ntBASIC-1.38□□□□□ -2.63
USH2AO75445 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.38□□□□□ -2.63
USH2AO75445 AC060780.3-201ENST00000589464 80 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 249.9 ms