Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-168P-201ENST00000516189 101 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 RNU6-135P-201ENST00000516769 101 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 Y_RNA.705-201ENST00000516862 110 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 AC011195.1-201ENST00000578177 177 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
VPS4BO75351 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS4BO75351 MIR18A-201ENST00000362310 71 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 Y_RNA.57-201ENST00000362806 113 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 SNORD36A-201ENST00000362874 73 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 RNA5SP457-201ENST00000363657 124 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 RNU6-640P-201ENST00000363693 105 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 RNU6-905P-201ENST00000384434 107 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 MIR181B2-201ENST00000385004 89 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 RNU6-972P-201ENST00000391208 107 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 RNU6-1254P-201ENST00000391266 104 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 RNA5SP89-201ENST00000410300 108 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 SNORA40.13-201ENST00000516379 120 ntBASIC0.86□□□□□ -2.27
VPS4BO75351 Y_RNA.178-201ENST00000363832 102 ntBASIC0.85□□□□□ -2.27
VPS4BO75351 MIR516A2-201ENST00000384888 90 ntBASIC0.85□□□□□ -2.27
VPS4BO75351 MIR516A1-201ENST00000385033 90 ntBASIC0.85□□□□□ -2.27
VPS4BO75351 RNU6-644P-201ENST00000391155 98 ntBASIC0.85□□□□□ -2.27
VPS4BO75351 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
VPS4BO75351 RNU6-887P-201ENST00000410660 100 ntBASIC0.84□□□□□ -2.27
VPS4BO75351 RNU7-195P-201ENST00000458793 62 ntBASIC0.84□□□□□ -2.27
VPS4BO75351 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
VPS4BO75351 AC103810.7-201ENST00000607821 91 ntBASIC0.84□□□□□ -2.27
VPS4BO75351 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
VPS4BO75351 SNORD114-23-201ENST00000363536 72 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 RNU7-61P-201ENST00000515897 61 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 Y_RNA.809-201ENST00000516058 95 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 Y_RNA.677-201ENST00000516401 85 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 MIR3678-201ENST00000578455 94 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 MIR4714-201ENST00000580728 77 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 MIR924-201ENST00000638017 53 ntBASIC0.83□□□□□ -2.28
VPS4BO75351 SNORD18A-201ENST00000363753 72 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 SNORD58A-201ENST00000383875 65 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 MIR599-201ENST00000385069 95 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 MIR644A-201ENST00000385262 94 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 AL513043.2-201ENST00000573941 143 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 AC025521.1-201ENST00000621624 286 ntBASIC0.82□□□□□ -2.28
VPS4BO75351 Y_RNA.115-201ENST00000363272 98 ntBASIC0.81□□□□□ -2.28
VPS4BO75351 RNU6-243P-201ENST00000391140 107 ntBASIC0.81□□□□□ -2.28
VPS4BO75351 MIR4639-201ENST00000584938 69 ntBASIC0.81□□□□□ -2.28
VPS4BO75351 AC010487.4-201ENST00000637027 61 ntBASIC0.81□□□□□ -2.28
VPS4BO75351 RNA5SP403-201ENST00000363598 108 ntBASIC0.8□□□□□ -2.28
VPS4BO75351 SNORD28-201ENST00000384706 75 ntBASIC0.8□□□□□ -2.28
VPS4BO75351 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
VPS4BO75351 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.8□□□□□ -2.28
VPS4BO75351 Y_RNA.648-201ENST00000459455 110 ntBASIC0.79□□□□□ -2.28
VPS4BO75351 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
VPS4BO75351 RNU6-469P-201ENST00000516253 101 ntBASIC0.79□□□□□ -2.28
VPS4BO75351 RNU6-1265P-201ENST00000516342 103 ntBASIC0.79□□□□□ -2.28
VPS4BO75351 RNA5SP47-201ENST00000517230 109 ntBASIC0.79□□□□□ -2.28
VPS4BO75351 U7.3-201ENST00000616123 62 ntBASIC0.79□□□□□ -2.28
VPS4BO75351 Y_RNA.68-201ENST00000362881 102 ntBASIC0.78□□□□□ -2.28
VPS4BO75351 SNORD116-10-201ENST00000363791 102 ntBASIC0.78□□□□□ -2.28
VPS4BO75351 Y_RNA.290-201ENST00000364879 114 ntBASIC0.78□□□□□ -2.28
VPS4BO75351 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
VPS4BO75351 Y_RNA.694-201ENST00000516677 117 ntBASIC0.78□□□□□ -2.28
VPS4BO75351 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
VPS4BO75351 SNORD115-24-201ENST00000363528 82 ntBASIC0.77□□□□□ -2.29
VPS4BO75351 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
VPS4BO75351 RNA5SP222-201ENST00000411039 105 ntBASIC0.77□□□□□ -2.29
VPS4BO75351 RNU7-161P-201ENST00000517289 62 ntBASIC0.77□□□□□ -2.29
VPS4BO75351 MALAT1.1-201ENST00000618249 95 ntBASIC0.77□□□□□ -2.29
VPS4BO75351 MIR488-201ENST00000365739 83 ntBASIC0.76□□□□□ -2.29
VPS4BO75351 RNU6-524P-201ENST00000384270 107 ntBASIC0.76□□□□□ -2.29
VPS4BO75351 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
VPS4BO75351 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
VPS4BO75351 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS4BO75351 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS4BO75351 Y_RNA.681-201ENST00000516445 113 ntBASIC0.75□□□□□ -2.29
VPS4BO75351 RNA5SP94-201ENST00000516917 108 ntBASIC0.75□□□□□ -2.29
VPS4BO75351 SCARNA16.5-201ENST00000517114 183 ntBASIC0.75□□□□□ -2.29
VPS4BO75351 MTRNR2L2-201ENST00000604882 87 ntBASIC0.75□□□□□ -2.29
VPS4BO75351 AC244669.1-204ENST00000621564 178 ntBASIC0.75□□□□□ -2.29
VPS4BO75351 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
VPS4BO75351 SNORA36.1-201ENST00000363424 132 ntBASIC0.74□□□□□ -2.29
VPS4BO75351 Y_RNA.283-201ENST00000364798 112 ntBASIC0.74□□□□□ -2.29
VPS4BO75351 MIR140-201ENST00000385282 100 ntBASIC0.74□□□□□ -2.29
VPS4BO75351 snoU13.11-201ENST00000459219 104 ntBASIC0.74□□□□□ -2.29
VPS4BO75351 RNA5SP330-201ENST00000517096 96 ntBASIC0.74□□□□□ -2.29
VPS4BO75351 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.74□□□□□ -2.29
VPS4BO75351 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS4BO75351 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS4BO75351 RNU6-957P-201ENST00000363652 99 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 Y_RNA.221-201ENST00000364248 96 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 RNU6-1229P-201ENST00000364295 107 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 RNY1P8-201ENST00000383970 114 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 RNU7-85P-201ENST00000458851 63 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 TRDV1-202ENST00000621643 102 ntBASIC0.73□□□□□ -2.29
VPS4BO75351 RNU6-1298P-201ENST00000362456 101 ntBASIC0.72□□□□□ -2.29
VPS4BO75351 Y_RNA.190-201ENST00000363964 101 ntBASIC0.72□□□□□ -2.29
VPS4BO75351 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms