Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SNORD45A-201ENST00000384512 84 ntBASIC2.04□□□□□ -2.08
PTCD1O75127 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.04□□□□□ -2.08
PTCD1O75127 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PTCD1O75127 AC013244.2-201ENST00000603396 103 ntBASIC2.04□□□□□ -2.08
PTCD1O75127 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
PTCD1O75127 RNU6-580P-201ENST00000365159 107 ntBASIC2.03□□□□□ -2.08
PTCD1O75127 Y_RNA.536-201ENST00000384621 113 ntBASIC2.03□□□□□ -2.08
PTCD1O75127 SNORA67.6-201ENST00000391093 99 ntBASIC2.03□□□□□ -2.08
PTCD1O75127 MTND4LP19-201ENST00000403051 166 ntBASIC2.03□□□□□ -2.08
PTCD1O75127 RNU6-1054P-201ENST00000411293 104 ntBASIC2.03□□□□□ -2.08
PTCD1O75127 MIR18B-201ENST00000454574 71 ntBASIC2.03□□□□□ -2.08
PTCD1O75127 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.03□□□□□ -2.08
PTCD1O75127 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PTCD1O75127 RNU4-58P-201ENST00000363192 141 ntBASIC2.02□□□□□ -2.09
PTCD1O75127 RNU1-36P-201ENST00000365130 165 ntBASIC2.02□□□□□ -2.09
PTCD1O75127 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
PTCD1O75127 RNU6-987P-201ENST00000384759 104 ntBASIC2.02□□□□□ -2.09
PTCD1O75127 MIR4696-201ENST00000581431 70 ntBASIC2.02□□□□□ -2.09
PTCD1O75127 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.02□□□□□ -2.09
PTCD1O75127 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.02□□□□□ -2.09
PTCD1O75127 AC023934.1-201ENST00000574529 2389 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PTCD1O75127 RNU6-403P-201ENST00000363163 104 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 RNU6-824P-201ENST00000363724 104 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 SNORA24B-201ENST00000384176 131 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 SNORA75.2-201ENST00000391138 150 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 SNORA75.3-201ENST00000391231 150 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 MIR934-201ENST00000401241 83 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 AC092628.1-201ENST00000436250 252 ntBASIC2.01□□□□□ -2.09
PTCD1O75127 SNORA7.1-201ENST00000363750 139 ntBASIC2□□□□□ -2.09
PTCD1O75127 Y_RNA.355-201ENST00000365462 98 ntBASIC2□□□□□ -2.09
PTCD1O75127 SNORD83.1-201ENST00000411362 77 ntBASIC2□□□□□ -2.09
PTCD1O75127 RNU6-902P-201ENST00000517212 91 ntBASIC2□□□□□ -2.09
PTCD1O75127 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2□□□□□ -2.09
PTCD1O75127 RNU6-664P-201ENST00000362381 107 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 SNORD115-22-201ENST00000364456 82 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 RNU6-53P-201ENST00000365367 106 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 SNORD116-24-201ENST00000384549 92 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PTCD1O75127 RNU6-630P-201ENST00000391258 106 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.99□□□□□ -2.09
PTCD1O75127 RNU4-37P-201ENST00000410214 84 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 RNU6-1052P-201ENST00000411398 104 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 RNU6-719P-201ENST00000516671 104 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 AC023827.1-201ENST00000569247 97 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.99□□□□□ -2.09
PTCD1O75127 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PTCD1O75127 Y_RNA.118-201ENST00000363300 101 ntBASIC1.98□□□□□ -2.09
PTCD1O75127 SNORD113.3-201ENST00000364630 78 ntBASIC1.98□□□□□ -2.09
PTCD1O75127 MIR1257-201ENST00000408490 117 ntBASIC1.98□□□□□ -2.09
PTCD1O75127 Y_RNA.809-201ENST00000516058 95 ntBASIC1.98□□□□□ -2.09
PTCD1O75127 RNU1-92P-201ENST00000517017 135 ntBASIC1.98□□□□□ -2.09
PTCD1O75127 AL109933.3-201ENST00000619095 188 ntBASIC1.98□□□□□ -2.09
PTCD1O75127 Y_RNA.13-201ENST00000362403 112 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 Y_RNA.363-201ENST00000365529 113 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 SNORD101-201ENST00000384027 73 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 MIR517C-201ENST00000385103 95 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 AC036111.3-201ENST00000526389 112 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 MIR4421-201ENST00000578133 69 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 MTRNR2L2-201ENST00000604882 87 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.97□□□□□ -2.09
PTCD1O75127 RNU6-1260P-201ENST00000362944 107 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 Y_RNA.239-201ENST00000364444 113 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 RNU6-392P-201ENST00000364926 101 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 RNU6-934P-201ENST00000365154 107 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 Y_RNA.443-201ENST00000384135 111 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 MIR519A1-201ENST00000385257 85 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 RNU6-910P-201ENST00000390844 107 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 Y_RNA.606-201ENST00000410579 103 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 AL591704.2-201ENST00000421658 181 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 RNU7-185P-201ENST00000459215 60 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 Y_RNA.697-201ENST00000516776 113 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 MIR3675-201ENST00000583661 73 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PTCD1O75127 U6.81-201ENST00000612550 106 ntBASIC1.96□□□□□ -2.1
PTCD1O75127 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
PTCD1O75127 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
PTCD1O75127 RNU6-681P-201ENST00000364012 104 ntBASIC1.95□□□□□ -2.1
PTCD1O75127 Y_RNA.258-201ENST00000364613 105 ntBASIC1.95□□□□□ -2.1
PTCD1O75127 SNORA31.24-201ENST00000517232 57 ntBASIC1.95□□□□□ -2.1
PTCD1O75127 MIR4771-2-201ENST00000577758 74 ntBASIC1.95□□□□□ -2.1
PTCD1O75127 MIR4771-1-201ENST00000582617 74 ntBASIC1.95□□□□□ -2.1
PTCD1O75127 MIR101-2-201ENST00000362195 79 ntBASIC1.94□□□□□ -2.1
PTCD1O75127 SNORD45.1-201ENST00000363181 77 ntBASIC1.94□□□□□ -2.1
PTCD1O75127 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
PTCD1O75127 AL354695.1-201ENST00000427935 228 ntBASIC1.94□□□□□ -2.1
PTCD1O75127 RNU6-881P-201ENST00000516813 102 ntBASIC1.94□□□□□ -2.1
PTCD1O75127 AL157834.3-201ENST00000615543 103 ntBASIC1.94□□□□□ -2.1
PTCD1O75127 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PTCD1O75127 RNA5SP245-201ENST00000364239 121 ntBASIC1.93□□□□□ -2.1
PTCD1O75127 RNU6-604P-201ENST00000390917 100 ntBASIC1.93□□□□□ -2.1
PTCD1O75127 SNORD111-201ENST00000408139 94 ntBASIC1.93□□□□□ -2.1
PTCD1O75127 MIR1276-201ENST00000408707 83 ntBASIC1.93□□□□□ -2.1
PTCD1O75127 MIR6082-201ENST00000613604 109 ntBASIC1.93□□□□□ -2.1
PTCD1O75127 SNORA25.4-201ENST00000363666 124 ntBASIC1.92□□□□□ -2.1
PTCD1O75127 RNU6-499P-201ENST00000365615 107 ntBASIC1.92□□□□□ -2.1
PTCD1O75127 SNORA80D-201ENST00000384488 135 ntBASIC1.92□□□□□ -2.1
PTCD1O75127 MIR451A-201ENST00000385059 72 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms